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L2_021_251G1_scaffold_163

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_163_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1111
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=2 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WXF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77578.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
putative transposase
L2_021_251G1_scaffold_163_2
unknown

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comp(1132..1254)
DNA (123bp) protein (41aa)

This feature has no annotations

L2_021_251G1_scaffold_163_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1282..2154)
DNA (873bp) protein (291aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridiales RepID=B0G6B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23094.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ABC-type multidrug transport system, ATPase component
L2_021_251G1_scaffold_163_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2159..2815)
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7FZY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23093.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_021_251G1_scaffold_163_5
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2812..3876)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=3 Tax=root RepID=B0G6B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96095.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L2_021_251G1_scaffold_163_6
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3947..5167)
DNA (1221bp) protein (407aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Lachnospiraceae RepID=B0G6B5_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L2_021_251G1_scaffold_163_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5137..5811)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23090.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_021_251G1_scaffold_163_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5906..6154)
DNA (249bp) protein (83aa)
Transcriptional regulatory protein, C-terminal domain protein n=3 Tax=Clostridiales RepID=B0G6B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23089.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_021_251G1_scaffold_163_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6228..6482)
DNA (255bp) protein (85aa)
Uncharacterized protein n=4 Tax=root RepID=B0G6B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98283.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L2_021_251G1_scaffold_163_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6759..8753
DNA (1995bp) protein (665aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=4 Tax=root RepID=B0G6B1_9FIRM
L2_021_251G1_scaffold_163_11
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8831..9172
DNA (342bp) protein (114aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46671.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
conserved hypothetical protein, ribA/ribD-fused
L2_021_251G1_scaffold_163_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9169..10842)
DNA (1674bp) protein (558aa)
Site-specific recombinases, DNA invertase Pin homologs n=10 Tax=root RepID=D4L4M6_9FIRM
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK78290.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_021_251G1_scaffold_163_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10920..11093)
DNA (174bp) protein (58aa)
Uncharacterized protein n=13 Tax=root RepID=U2QIK9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY99021.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L2_021_251G1_scaffold_163_14
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11552..11794)
DNA (243bp) protein (81aa)
Uncharacterized protein n=20 Tax=root RepID=C0CY92_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGX69114.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L2_021_251G1_scaffold_163_15
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11778..12215)
DNA (438bp) protein (146aa)
Uncharacterized protein n=25 Tax=root RepID=C9YMG7_CLODR
DNA-directed RNA polymerase specialized sigma subunit
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:CBL14566.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_021_251G1_scaffold_163_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12685..13671)
DNA (987bp) protein (329aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
23S rRNA m(2)A-2503 methyltransferase {ECO:0000313|EMBL:CBK78286.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK78286.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
23S rRNA m(2)A-2503 methyltransferase n=8 Tax=root RepID=D4ML37_9FIRM
L2_021_251G1_scaffold_163_17
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13688..13873)
DNA (186bp) protein (62aa)
Uncharacterized protein n=17 Tax=Bacteria RepID=C0CY97_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERK43600.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_021_251G1_scaffold_163_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14272..14628
DNA (357bp) protein (119aa)
Transcriptional regulator n=1 Tax=human gut metagenome RepID=K1RA56_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGF54144.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Helix-turn-helix.
L2_021_251G1_scaffold_163_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14828..15157
DNA (330bp) protein (110aa)
Bacterial mobilisation protein (MobC) n=20 Tax=root RepID=D4L4L6_9FIRM
Bacterial mobilisation protein (MobC).
Mobilization protein {ECO:0000313|EMBL:EGA92923.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_021_251G1_scaffold_163_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15118..16452
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=G5HF82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54142.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Relaxase/Mobilisation nuclease domain.
L2_021_251G1_scaffold_163_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16654..16863)
DNA (210bp) protein (70aa)
Uncharacterized protein n=15 Tax=Bacteria RepID=D5Q4B8_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34465.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_021_251G1_scaffold_163_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16868..20215)
DNA (3348bp) protein (1116aa)
Antirestriction protein n=9 Tax=root RepID=E7GQ73_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:KGF54140.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L2_021_251G1_scaffold_163_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20341..20709)
DNA (369bp) protein (123aa)
Uncharacterized protein n=8 Tax=Firmicutes RepID=G1VJR1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34463.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_021_251G1_scaffold_163_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20706..22781)
DNA (2076bp) protein (692aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=2 Tax=Oscillibacter RepID=U2QPB9_9FIRM
L2_021_251G1_scaffold_163_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22778..23503)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54137.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_021_251G1_scaffold_163_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23493..23759)
DNA (267bp) protein (89aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E9SNM7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI66114.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_021_251G1_scaffold_163_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23781..25748)
DNA (1968bp) protein (656aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HF90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54135.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
DNA-repair protein
L2_021_251G1_scaffold_163_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25745..26701)
DNA (957bp) protein (319aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
DNA modification methylase (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F4G9_9FIRM
L2_021_251G1_scaffold_163_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26698..29094)
DNA (2397bp) protein (799aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=G6BDD1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGF54133.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_021_251G1_scaffold_163_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29054..29446)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNM3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:KGF54132.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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