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L2_021_251G1_scaffold_189

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_189_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..850)
DNA (849bp) protein (283aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Glutamate--tRNA ligase n=5 Tax=Bifidobacterium bifidum RepID=E3ELN8_BIFBS
L2_021_251G1_scaffold_189_2
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1108..1203)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HCD1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23827.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_021_251G1_scaffold_189_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2306..2968)
DNA (663bp) protein (221aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Haloacid dehalogenase-like hydrolase n=5 Tax=Bifidobacterium bifidum RepID=E3ELN6_BIFBS
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:ADO52431.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_251G1_scaffold_189_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3396..4463
DNA (1068bp) protein (356aa)
Nitrate/sulfonate/taurine transport system, substrate-binding protein n=3 Tax=Bifidobacterium bifidum RepID=E3ELN5_BIFBS
nitrate/sulfonate/taurine transport system, substrate-binding protein
Solute binding protein of ABC transporter system {ECO:0000313|EMBL:KFI42316.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_251G1_scaffold_189_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4698..5483
DNA (786bp) protein (262aa)
Solute binding protein of ABC transporter system n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYV8_BIFBP
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EKE50222.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_021_251G1_scaffold_189_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5760..6671)
DNA (912bp) protein (304aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E4V7G2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83881.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_251G1_scaffold_189_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6919..7578)
DNA (660bp) protein (220aa)
gpm; phosphoglycerate mutase (EC:5.4.2.1)
Gpm Phosphoglycerate mutase n=2 Tax=Bifidobacterium bifidum RepID=E4NYV6_BIFBP
Phosphoglycerate mutase {ECO:0000313|EMBL:AFL03779.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_251G1_scaffold_189_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7980..9410
DNA (1431bp) protein (477aa)
Major facilitator superfamily MFS_1 n=4 Tax=Bifidobacterium bifidum RepID=E4NYV5_BIFBP
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:EKE50225.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_021_251G1_scaffold_189_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9502..10035)
DNA (534bp) protein (178aa)
GtrA family protein n=5 Tax=Bifidobacterium RepID=E3ELN0_BIFBS
hypothetical protein
GtrA-like protein {ECO:0000313|EMBL:ERI83877.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97411.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_251G1_scaffold_189_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10196..10543
DNA (348bp) protein (116aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WFW3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52424.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_251G1_scaffold_189_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10939..12549)
DNA (1611bp) protein (537aa)
Formate-tetrahydrofolate ligase n=4 Tax=Bifidobacterium RepID=E3ELM8_BIFBS
fhs; formate-tetrahydrofolate ligase
Formate-tetrahydrofolate ligase {ECO:0000313|EMBL:CDB23469.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_251G1_scaffold_189_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12549..14162)
DNA (1614bp) protein (538aa)
PepD Dipeptidase A n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYV1_BIFBP
pepD; dipeptidase A PepD
Putative dipeptidase A {ECO:0000313|EMBL:AFL03774.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_251G1_scaffold_189_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14287..14925)
DNA (639bp) protein (213aa)
Phospholipid-binding protein n=5 Tax=Bifidobacterium RepID=I3WFW0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ97407.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
phospholipid-binding protein
L2_021_251G1_scaffold_189_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15014..20893)
DNA (5880bp) protein (1960aa)
Alpha-fucosidase n=1 Tax=Bifidobacterium bifidum RepID=Q6JV24_BIFBI
Alpha-fucosidase {ECO:0000313|EMBL:AAQ72464.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
alpha-L-fucosidase
L2_021_251G1_scaffold_189_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21726..23687)
DNA (1962bp) protein (654aa)
ABC transporter ATP-binding protein/permease (EC:3.6.3.44)
ATP-binding cassette subfamily B n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GQE0_9BIFI
ATP-binding cassette subfamily B {ECO:0000313|EMBL:CDB23486.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_251G1_scaffold_189_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23717..25600)
DNA (1884bp) protein (628aa)
ATP-binding cassette, subfamily B n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELM3_BIFBS
ATP-binding cassette, subfamily B
ATP-binding cassette, subfamily B {ECO:0000313|EMBL:ADO52418.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_251G1_scaffold_189_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25816..26346)
DNA (531bp) protein (177aa)
Transcriptional regulator, MarR family n=7 Tax=Bifidobacterium RepID=E3ELM2_BIFBS
putative MarR-type transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KFI42303.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_251G1_scaffold_189_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26551..26838
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4NYM0_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42302.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_251G1_scaffold_189_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27225..28217)
DNA (993bp) protein (331aa)
Putative oxidoreductase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LEX0_BIFBI
Putative oxidoreductase {ECO:0000313|EMBL:EKF16279.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
yccK; putative oxidoreductase
L2_021_251G1_scaffold_189_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28453..29370)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HS78_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50238.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
Displaying 20 items

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