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L2_021_251G1_scaffold_230

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_230_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..333)
DNA (333bp) protein (111aa)
30S ribosomal protein S1 n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MWF0_BIFBI
30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:EEI81011.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_021_251G1_scaffold_230_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(453..1328)
DNA (876bp) protein (292aa)
Bifunctional protein FolD n=18 Tax=Bifidobacterium RepID=FOLD_BIFLO
methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_251G1_scaffold_230_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1432..2628
DNA (1197bp) protein (399aa)
ABC-type metal ion transport system, periplasmic component/surface adhesin n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D973_BIFLN
ABC-type metal ion transport system, periplasmic component/surface adhesin
ABC-type metal ion transport system, periplasmic component/surface adhesin {ECO:0000313|EMBL:CBK70726.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_251G1_scaffold_230_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2801..3691
DNA (891bp) protein (297aa)
ABC-type Mn/Zn transport systems, ATPase component n=2 Tax=Bifidobacterium longum RepID=D6D974_BIFLN
ABC-type Mn/Zn transport systems, ATPase component
Metals ABC transporter, ATPase {ECO:0000313|EMBL:ESV33231.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_021_251G1_scaffold_230_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3758..4591
DNA (834bp) protein (278aa)
Permease of the ABC transporter n=1 Tax=Bifidobacterium longum E18 RepID=V6XVA0_BIFLN
Permease of the ABC transporter {ECO:0000313|EMBL:ESV33230.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
ABC transporter permease
L2_021_251G1_scaffold_230_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4642..5166)
DNA (525bp) protein (175aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Bifidobacterium longum E18 RepID=V6Y078_BIFLN
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L2_021_251G1_scaffold_230_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5273..5866)
DNA (594bp) protein (198aa)
Transcriptional_regulator n=10 Tax=Bifidobacterium longum RepID=B3DSS8_BIFLD
transcriptional regulator
CarD-like protein {ECO:0000313|EMBL:EIJ23904.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_251G1_scaffold_230_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6044..8296
DNA (2253bp) protein (751aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
1,4-alpha-glucan-branching enzyme n=5 Tax=Bifidobacterium longum RepID=V6XVF3_BIFLN
1,4-alpha-glucan branching protein
L2_021_251G1_scaffold_230_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8332..9054
DNA (723bp) protein (241aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=19 Tax=Bifidobacterium RepID=D6D978_BIFLN
two-component response regulator
Chemotaxis protein CheY {ECO:0000313|EMBL:AIW43581.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_230_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9054..10127
DNA (1074bp) protein (358aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Histidine kinase sensor of two-component system n=17 Tax=Bifidobacterium RepID=Q8G5K8_BIFLO
two-component sensor kinase
L2_021_251G1_scaffold_230_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10195..10581
DNA (387bp) protein (129aa)
SOS-response transcriptional repressor n=11 Tax=Bifidobacterium RepID=B3DST2_BIFLD
lexA2; lexa2
Peptidase S24 {ECO:0000313|EMBL:KEY32632.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_251G1_scaffold_230_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10497..11219)
DNA (723bp) protein (241aa)
Phosphoribosyl transferase domain protein n=2 Tax=Bifidobacterium longum RepID=C2GU95_BIFLN
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EEI81022.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_021_251G1_scaffold_230_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11229..12035)
DNA (807bp) protein (269aa)
Phosphomannomutase {ECO:0000313|EMBL:ESV33223.1}; EC=5.4.2.2 {ECO:0000313|EMBL:ESV33223.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
HAD-superfamily hydrolase, subfamily IIB n=7 Tax=Bifidobacterium RepID=D6D981_BIFLN
hypothetical protein
L2_021_251G1_scaffold_230_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12124..12552
DNA (429bp) protein (143aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=Q8G5K4_BIFLO
peptidase
Uncharacterized protein {ECO:0000313|EMBL:EEQ54845.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_021_251G1_scaffold_230_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12655..14196)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=B3DST6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43576.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_230_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14193..17288)
DNA (3096bp) protein (1032aa)
Uncharacterized protein n=8 Tax=Bifidobacterium longum RepID=Q8G5K2_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:AAN24815.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
hypothetical protein
L2_021_251G1_scaffold_230_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17332..17631)
DNA (300bp) protein (100aa)
Transcriptional regulator WhiB2 n=15 Tax=Bifidobacterium RepID=WHIB2_BIFLO
transcriptional regulator
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_251G1_scaffold_230_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17882..19315
DNA (1434bp) protein (478aa)
Transcriptional regulator n=6 Tax=Bifidobacterium RepID=B3DST9_BIFLD
lytR; transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCY95601.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_021_251G1_scaffold_230_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19485..21311
DNA (1827bp) protein (609aa)
DNA segregation ATPase n=11 Tax=Bifidobacterium RepID=B3DSU0_BIFLD
Cell division protein FtsK {ECO:0000313|EMBL:KEY21896.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L2_021_251G1_scaffold_230_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21425..21703
DNA (279bp) protein (93aa)
Transcriptional regulator WhiB1 n=23 Tax=Bifidobacterium RepID=WHIB1_BIFLO
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_021_251G1_scaffold_230_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21776..23263)
DNA (1488bp) protein (496aa)
Histidine kinase-like protein n=17 Tax=Bifidobacterium RepID=Q8G5J8_BIFLO
two-component sensor kinase
Histidine kinase {ECO:0000313|EMBL:KHD96073.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_021_251G1_scaffold_230_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23426..24199)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARE3_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97826.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_021_251G1_scaffold_230_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24357..25268
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARE4_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97827.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_021_251G1_scaffold_230_24
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25321..25425
DNA (105bp) protein (35aa)
IS3 family transposase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2X7_BIFAA
tnp; IS3 family transposase
IS3 family transposase {ECO:0000313|EMBL:KFI85011.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Displaying 24 items

View Taxonomy