ggKbase home page

L2_021_251G1_scaffold_253

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_253_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..211
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Escherichia coli MS 107-1 RepID=D8EH97_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFK53190.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
hypothetical protein
L2_021_251G1_scaffold_253_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

563..2170
DNA (1608bp) protein (536aa)
Periplasmic dipeptide transport protein n=496 Tax=Bacteria RepID=DPPA_ECOLI
dipeptide transport protein
Dipeptide ABC transporter, periplasmic dipeptide-binding protein DppA {ECO:0000313|EMBL:ESE01849.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L2_021_251G1_scaffold_253_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2217..3152
DNA (936bp) protein (312aa)
Dipeptide ABC transporter, permease protein DppB n=1 Tax=Escherichia coli 101-1 RepID=B3X863_ECOLX
dppB; dipeptide transport system permease DppB
Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:ESD65586.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_021_251G1_scaffold_253_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3162..4064
DNA (903bp) protein (301aa)
Dipeptide transport system permease protein DppC n=1353 Tax=Bacteria RepID=DPPC_ECO57
dppC; dipeptide transporter
Dipeptide transport system permease dppC {ECO:0000313|EMBL:EQY80684.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L2_021_251G1_scaffold_253_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4075..5058
DNA (984bp) protein (328aa)
Dipeptide transport ATP-binding protein DppD n=783 Tax=Enterobacteriaceae RepID=DPPD_ECO57
oligopeptide/dipeptide ABC transporter ATPase
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDV40840.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L2_021_251G1_scaffold_253_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5055..6059
DNA (1005bp) protein (335aa)
Dipeptide ABC transporter, ATP-binding protein DppF n=36 Tax=Escherichia coli RepID=A7ZT84_ECO24
dppF; dipeptide transporter ATP-binding subunit
Oligopeptide/dipeptide transporter, C-terminal domain protein {ECO:0000313|EMBL:EIH44316.1}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
L2_021_251G1_scaffold_253_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6089..7360)
DNA (1272bp) protein (424aa)
Serine transporter family protein n=215 Tax=Enterobacteriaceae RepID=A7ZT83_ECO24
yhjV; transporter
Serine transporter {ECO:0000313|EMBL:EJE71421.1}; TaxID=1165944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H8 str. CVM9634.;"
L2_021_251G1_scaffold_253_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7690..9588)
DNA (1899bp) protein (633aa)
Uncharacterized protein n=494 Tax=Enterobacteriaceae RepID=C3SNF3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX35666.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L2_021_251G1_scaffold_253_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9585..9776)
DNA (192bp) protein (64aa)
Protein BcsF homolog n=1329 Tax=Enterobacteriaceae RepID=BCSF_ECOL6
cellulose biosynthesis protein BcsF
Celllulose biosynthesis operon protein BcsF/YhjT {ECO:0000313|EMBL:EHP63847.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L2_021_251G1_scaffold_253_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9773..11332)
DNA (1560bp) protein (520aa)
Cellulose biosynthesis protein BcsE n=259 Tax=Escherichia RepID=C6EEE7_ECOBD
bcsE; cellulose biosynthesis protein BcsE
Cellulose biosynthesis protein BcsE {ECO:0000313|EMBL:KDU29536.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L2_021_251G1_scaffold_253_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11617..11805
DNA (189bp) protein (63aa)
Uncharacterized protein YhjR n=596 Tax=Enterobacteriaceae RepID=YHJR_ECOLI
yhjR; hypothetical protein
PF10945 family protein {ECO:0000313|EMBL:EII44241.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
L2_021_251G1_scaffold_253_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11817..12569
DNA (753bp) protein (251aa)
Putative cellulose biosynthesis protein BcsQ n=459 Tax=Enterobacteriaceae RepID=BCSQ_ECOLI
cell division protein
Cellulose synthase operon protein YhjQ {ECO:0000313|EMBL:KEL84412.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
L2_021_251G1_scaffold_253_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12566..15184
DNA (2619bp) protein (873aa)
bcsA; cellulose synthase catalytic subunit (EC:2.4.1.12)
Cellulose synthase catalytic subunit [UDP-forming] n=211 Tax=Escherichia RepID=BCSA_ECOLI
Cellulose synthase catalytic subunit {ECO:0000313|EMBL:EKJ80960.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L2_021_251G1_scaffold_253_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15231..17534
DNA (2304bp) protein (768aa)
Cyclic di-GMP-binding protein n=1 Tax=Escherichia coli HVH 139 (4-3192644) RepID=T7BZD8_ECOLX
Cyclic di-GMP-binding protein {ECO:0000313|EMBL:EGW86716.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
cellulose synthase regulator protein
L2_021_251G1_scaffold_253_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17541..18647
DNA (1107bp) protein (369aa)
endo-1,4-D-glucanase (EC:3.2.1.4)
Glucanase {ECO:0000256|RuleBase:RU361167}; EC=3.2.1.- {ECO:0000256|RuleBase:RU361167};; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
Endoglucanase n=3 Tax=Escherichia coli RepID=I2PIB9_ECOLX
L2_021_251G1_scaffold_253_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18629..22102
DNA (3474bp) protein (1158aa)
Cellulose synthase operon protein C n=1 Tax=Escherichia coli OK1357 RepID=E7JA61_ECOLX
bcsC; cellulose synthase subunit
Cellulose synthase subunit BcsC {ECO:0000313|EMBL:AFH13346.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L2_021_251G1_scaffold_253_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22223..24172
DNA (1950bp) protein (650aa)
Uncharacterized protein n=234 Tax=Enterobacteriaceae RepID=J7R799_ECOLX
yhjK; putative diguanylate cyclase
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ESA64995.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L2_021_251G1_scaffold_253_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24355..25641
DNA (1287bp) protein (429aa)
C4-dicarboxylate transport protein n=1124 Tax=Enterobacteriaceae RepID=DCTA_ECO24
sodium:dicarboxylate symporter
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
L2_021_251G1_scaffold_253_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25862..27358
DNA (1497bp) protein (499aa)
Insulinase family protein n=3 Tax=Escherichia coli RepID=E7JA58_ECOLX
yhjJ; hypothetical protein
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:ADD58733.1}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
L2_021_251G1_scaffold_253_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27454..28383)
DNA (930bp) protein (310aa)
kdgK; 2-dehydro-3-deoxygluconokinase (EC:2.7.1.45)
Ketodeoxygluconokinase n=2 Tax=Escherichia coli RepID=V8K727_ECOLX
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:EQN22931.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L2_021_251G1_scaffold_253_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28615..29382
DNA (768bp) protein (256aa)
Cyclic di-GMP phosphodiesterase YhjH n=420 Tax=Enterobacteriaceae RepID=YHJH_ECOLI
EAL domain-containing protein
Diguanylate phosphodiesterase {ECO:0000313|EMBL:EKJ80970.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L2_021_251G1_scaffold_253_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29452..31659
DNA (2208bp) protein (736aa)
Uncharacterized protein YhjG n=291 Tax=Enterobacteriaceae RepID=YHJG_ECOLI
outer membrane biogenesis protein
AsmA family protein {ECO:0000313|EMBL:KEN94612.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L2_021_251G1_scaffold_253_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31736..32899)
DNA (1164bp) protein (388aa)
Inner membrane metabolite transporter yhjE n=2 Tax=Escherichia coli RepID=T9MSS3_ECOLX
MFS transporter metabolite:H+ symporter (MHS) family protein
Transporter {ECO:0000313|EMBL:EYV61420.1}; TaxID=1446502 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H11 str. 2010C-3214.;"
L2_021_251G1_scaffold_253_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33310..34323)
DNA (1014bp) protein (338aa)
Inner membrane protein yhjD n=1008 Tax=Enterobacteriaceae RepID=C3SNL7_ECOLX
hypothetical protein
Inner membrane protein YhjD {ECO:0000313|EMBL:KEN44990.1}; TaxID=1444091 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C2.;"
L2_021_251G1_scaffold_253_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34372..35343)
DNA (972bp) protein (324aa)
Predicted DNA-binding transcriptional regulator n=324 Tax=Enterobacteriaceae RepID=C8TJV8_ECO26
yhjC; DNA-binding transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:ESC98392.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
L2_021_251G1_scaffold_253_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35791..36393
DNA (603bp) protein (201aa)
Putative HTH-type transcriptional regulator YhjB n=528 Tax=Enterobacteriaceae RepID=YHJB_ECOLI
two component LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ESD73016.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_021_251G1_scaffold_253_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36444..36929)
DNA (486bp) protein (162aa)
treF; trehalase (EC:3.2.1.28)
Cytoplasmic trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; EC=3.2.1.28 {ECO:0000256|HAMAP-Rule:MF_01059};; Alpha,alpha-trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; Alpha,alpha-trehalose glucohydrolase {ECO:0000256|HAMAP-Rule:MF_01059}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
Cytoplasmic trehalase n=1 Tax=Escherichia coli P0304816.14 RepID=N3ZNJ9_ECOLX
Displaying 27 items

View Taxonomy