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L2_021_251G1_scaffold_268

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_268_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..112
DNA (111bp) protein (37aa)
Hypothetical permease n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DT07_BIFLD
permease
Permease {ECO:0000313|EMBL:AIW43515.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_268_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

280..720
DNA (441bp) protein (147aa)
Putative glycoside hydrolase {ECO:0000313|EMBL:ESV33149.1}; EC=3.2.1.31 {ECO:0000313|EMBL:ESV33149.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Putative glycoside hydrolase n=1 Tax=Bifidobacterium longum E18 RepID=V6Y006_BIFLN
beta-glucuronidase
L2_021_251G1_scaffold_268_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(825..2201)
DNA (1377bp) protein (459aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Glutamine synthetase n=5 Tax=Bifidobacterium longum RepID=B3DT05_BIFLD
glutamine synthase
L2_021_251G1_scaffold_268_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2521..3303)
DNA (783bp) protein (261aa)
Conserved hypothetical transmembrane protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT94_BIFLJ
Membrane protein {ECO:0000313|EMBL:KEY21833.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L2_021_251G1_scaffold_268_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3387..4877)
DNA (1491bp) protein (497aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Acetoin/pyruvate dehydrogenase complex E3 component n=6 Tax=Bifidobacterium RepID=B3DT03_BIFLD
Putative dihydrolipoyl dehydrogenase {ECO:0000313|EMBL:EIJ26542.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_251G1_scaffold_268_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5026..5649)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUG7_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66219.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_021_251G1_scaffold_268_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5741..7108
DNA (1368bp) protein (456aa)
Peptidase dimerization domain protein n=3 Tax=Bifidobacterium longum RepID=C2GUG6_BIFLN
hypothetical protein
Peptidase dimerization domain protein {ECO:0000313|EMBL:EEI81093.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_021_251G1_scaffold_268_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7408..8007
DNA (600bp) protein (200aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=Q8G5E3_BIFLO
hypothetical protein
ABC transporter permease {ECO:0000313|EMBL:AIW43520.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_268_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8007..9482
DNA (1476bp) protein (492aa)
CbiO3 n=6 Tax=Bifidobacterium RepID=E4QZL9_BIFLM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIW43521.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_268_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9479..10306
DNA (828bp) protein (276aa)
ABC-type cobalt transport system permease component n=8 Tax=Bifidobacterium RepID=B3DSZ8_BIFLD
cbiQ2; cbiq2
Cobalt ABC transporter permease {ECO:0000313|EMBL:AIW43522.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_268_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10418..11296
DNA (879bp) protein (293aa)
rRNA methylase {ECO:0000313|EMBL:KFI67682.1}; EC=2.1.1.185 {ECO:0000313|EMBL:KFI67682.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
rRNA methylase n=2 Tax=Bifidobacterium longum RepID=B3DSZ7_BIFLD
tRNA/rRNA methyltransferase SpoU
L2_021_251G1_scaffold_268_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11362..12417
DNA (1056bp) protein (352aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Bifidobacterium longum RepID=B3DSZ6_BIFLD
pheS; phenylalanyl-tRNA synthetase subunit alpha
L2_021_251G1_scaffold_268_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12425..15034
DNA (2610bp) protein (870aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTA3_BIFLJ
phenylalanyl-tRNA synthetase subunit beta
L2_021_251G1_scaffold_268_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15065..15751
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTA4_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:KFI69701.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_021_251G1_scaffold_268_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15844..16944
DNA (1101bp) protein (367aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ARW1_BIFLN
N-acetyl-gamma-glutamyl-phosphate reductase
L2_021_251G1_scaffold_268_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16941..18116
DNA (1176bp) protein (392aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NG31_9BIFI
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_021_251G1_scaffold_268_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18253..19209
DNA (957bp) protein (319aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Acetylglutamate kinase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTA7_BIFLJ
acetylglutamate kinase
L2_021_251G1_scaffold_268_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19199..20494
DNA (1296bp) protein (432aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Acetylornithine aminotransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTP3_BIFLS
argD; acetylornithine aminotransferase
L2_021_251G1_scaffold_268_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20538..21503
DNA (966bp) protein (322aa)
Ornithine carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000255|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000255|HAMAP-Rule:MF_01109};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Ornithine carbamoyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=OTC_BIFLS
ornithine carbamoyltransferase
L2_021_251G1_scaffold_268_20
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21500..22012
DNA (513bp) protein (171aa)
Arginine repressor n=4 Tax=Bifidobacterium RepID=E4QZK8_BIFLM
argR; argr
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_021_251G1_scaffold_268_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22095..23333
DNA (1239bp) protein (413aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Argininosuccinate synthase n=6 Tax=Bifidobacterium longum RepID=D6ZTB1_BIFLJ
argininosuccinate synthase
L2_021_251G1_scaffold_268_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23509..23874
DNA (366bp) protein (122aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Argininosuccinate lyase; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Argininosuccinate lyase n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZTB2_BIFLJ
argininosuccinate lyase
Displaying 22 items

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