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L2_021_251G1_scaffold_281

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_281_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(184..741)
DNA (558bp) protein (186aa)
Cell wall binding repeat-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4Z9_9CLOT
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:EHI99448.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
cell wall binding repeat-containing protein
L2_021_251G1_scaffold_281_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(832..1794)
DNA (963bp) protein (321aa)
uvsE; UV DNA damage endonuclease UvsE (EC:3.-.-.-)
UV DNA damage endonuclease UvsE {ECO:0000313|EMBL:AGX43742.1}; EC=3.-.-.- {ECO:0000313|EMBL:AGX43742.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
UV DNA damage endonuclease UvsE n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWA6_CLOSA
L2_021_251G1_scaffold_281_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1880..2305)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT81_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43743.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_251G1_scaffold_281_4
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2630..2764)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVS7_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43746.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_251G1_scaffold_281_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2792..2938)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M789_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ01920.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_021_251G1_scaffold_281_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2991..4061)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVT1_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43751.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_251G1_scaffold_281_7
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4073..5080)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LW34_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR34564.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_251G1_scaffold_281_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5095..7602)
DNA (2508bp) protein (836aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U4D3_9CLOT
hgdC; activator of (R)-2-hydroxyglutaryl-CoA dehydratase HgdC
Uncharacterized protein {ECO:0000313|EMBL:EKQ56241.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_021_251G1_scaffold_281_9
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7614..9335)
DNA (1722bp) protein (574aa)
2-hydroxyglutaryl-CoA dehydratase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRV2_CLOPA
2-hydroxyglutaryl-CoA dehydratase {ECO:0000313|EMBL:ETD66132.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
putative CoA-substrate-specific enzyme activase
L2_021_251G1_scaffold_281_10
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9488..9835
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LXE4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57930.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_021_251G1_scaffold_281_11
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9956..10609)
DNA (654bp) protein (218aa)
Transglutaminase-like enzyme, putative cysteine protease n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T8U7_9CLOT
Transglutaminase-like enzyme, putative cysteine protease {ECO:0000313|EMBL:EKQ56243.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
transglutaminase-like enzyme, putative cysteine protease
L2_021_251G1_scaffold_281_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10771..11409)
DNA (639bp) protein (213aa)
Regulatory protein RecX n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVT5_CLOSA
recX; regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_251G1_scaffold_281_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11440..12687)
DNA (1248bp) protein (416aa)
Peptidase, M16 family n=3 Tax=Clostridium butyricum RepID=B1QSR4_CLOBU
Peptidase M16 domain protein {ECO:0000313|EMBL:EEP54932.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative zinc-dependent protease
L2_021_251G1_scaffold_281_14
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12885..13556
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Clostridium RepID=A6LW28_CLOB8
two component transcriptional regulator
PhoB family transcriptional regulator {ECO:0000313|EMBL:ETD66137.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_021_251G1_scaffold_281_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13556..15079
DNA (1524bp) protein (508aa)
resE8; sensor histidine kinase ResE (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Sensor histidine kinase ResE n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSH1_CLOSA
L2_021_251G1_scaffold_281_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15153..15332)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2V3_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07243.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_021_251G1_scaffold_281_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15371..15826)
DNA (456bp) protein (152aa)
fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
3-ketoacyl-ACP reductase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FPC2_CLOPA
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:ETD66139.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_021_251G1_scaffold_281_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16230..17162)
DNA (933bp) protein (311aa)
peptidase M19 n=1 Tax=Clostridium beijerinckii RepID=UPI000313E3D7
membrane dipeptidase family protein
Membrane dipeptidase family protein {ECO:0000313|EMBL:AIY83361.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_021_251G1_scaffold_281_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17191..18138)
DNA (948bp) protein (316aa)
Ser/Thr protein phosphatase family protein n=2 Tax=Clostridium botulinum B RepID=B2TN53_CLOBB
Ser/Thr protein phosphatase family protein
Conserved protein {ECO:0000313|EMBL:CDH90005.1}; Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:ACD21866.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_021_251G1_scaffold_281_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18273..19595)
DNA (1323bp) protein (441aa)
glyA; serine hydroxymethyltransferase GlyA (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Serine hydroxymethyltransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSH6_CLOSA
L2_021_251G1_scaffold_281_21
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19918..20541)
DNA (624bp) protein (208aa)
Cell wall hydrolase/autolysin n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M0K3_CLOB8
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:ABR36133.1}; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_251G1_scaffold_281_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20623..21204)
DNA (582bp) protein (194aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX51_CLOSA
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AGX45113.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_251G1_scaffold_281_23
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21388..22143
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUK8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR34038.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_251G1_scaffold_281_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22165..22626
DNA (462bp) protein (154aa)
Membrane spanning protein n=4 Tax=Clostridium butyricum RepID=B1QTK9_CLOBU
Membrane spanning protein {ECO:0000313|EMBL:EEP55041.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_021_251G1_scaffold_281_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22669..23130)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQH1_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42773.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_251G1_scaffold_281_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23788..27399)
DNA (3612bp) protein (1204aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Pyruvate carboxylase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7N3_9CLOT
pyruvate carboxylase
L2_021_251G1_scaffold_281_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27952..28248)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTA4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43768.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_251G1_scaffold_281_28
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28278..28622)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0002EEE7E9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF55591.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_021_251G1_scaffold_281_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28690..29145)
DNA (456bp) protein (152aa)
Transketolase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWD9_CLOSA
transketolase
Transketolase {ECO:0000313|EMBL:AGX43777.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_251G1_scaffold_281_30
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29174..29983)
DNA (810bp) protein (270aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
rluF; ribosomal large subunit pseudouridine synthase F (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TAT5_9CLOT
Displaying items 1-30 of 47 in total

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