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L2_021_251G1_scaffold_397

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_397_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..302)
DNA (300bp) protein (100aa)
RNA polymerase factor sigma-70 n=2 Tax=Ruminococcus RepID=R6NXY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23070.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_021_251G1_scaffold_397_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(452..952)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=V8C8K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23071.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L2_021_251G1_scaffold_397_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1170..2108
DNA (939bp) protein (313aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=U2ETX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23072.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
plasmid segregation actin-type ATPase ParM
L2_021_251G1_scaffold_397_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2113..2484
DNA (372bp) protein (124aa)
Uncharacterized protein n=5 Tax=root RepID=B0G695_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23073.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_021_251G1_scaffold_397_5
unknown

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2504..2611
DNA (108bp) protein (36aa)

This feature has no annotations

L2_021_251G1_scaffold_397_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2635..2964)
DNA (330bp) protein (110aa)
DNA-binding helix-turn-helix protein n=6 Tax=root RepID=B0G696_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23074.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Helix-turn-helix.
L2_021_251G1_scaffold_397_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3378..3818
DNA (441bp) protein (147aa)
Sigma-70, region 4 n=5 Tax=root RepID=B0G697_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:EDR46658.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Sigma-70, region 4.
L2_021_251G1_scaffold_397_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3818..4006
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G698_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98298.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L2_021_251G1_scaffold_397_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4137..5492)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=5 Tax=root RepID=B0G699_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ERI98297.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
putative efflux protein, MATE family
L2_021_251G1_scaffold_397_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5703..6227
DNA (525bp) protein (175aa)
Transcriptional regulator, PadR family n=4 Tax=root RepID=B0G6A0_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDR46661.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
transcriptional regulator, PadR family
L2_021_251G1_scaffold_397_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6381..6722)
DNA (342bp) protein (114aa)
Transcriptional regulatory protein, C-terminal domain protein n=4 Tax=root RepID=B0G6A1_9FIRM
Transcriptional regulatory protein {ECO:0000313|EMBL:ERI98295.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
two-component response regulator
L2_021_251G1_scaffold_397_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6976..7191
DNA (216bp) protein (72aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8C6U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23079.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
two component transcriptional regulator, winged helix family
L2_021_251G1_scaffold_397_13
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7493..8152
DNA (660bp) protein (220aa)
Resolvase, N-terminal domain protein n=2 Tax=Lachnospiraceae RepID=B0G6A3_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERI98293.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_021_251G1_scaffold_397_14
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8199..8420
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46665.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L2_021_251G1_scaffold_397_15
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8430..8786
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98291.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L2_021_251G1_scaffold_397_16
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8789..9046
DNA (258bp) protein (86aa)
Toxin-antitoxin system, toxin component, HicA family n=4 Tax=Clostridiales RepID=B0G6A6_9FIRM
Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EEG88200.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
YcfA-like protein.
L2_021_251G1_scaffold_397_17
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9030..9392
DNA (363bp) protein (121aa)
Toxin-antitoxin system, antitoxin component, HicB family n=4 Tax=Clostridiales RepID=B0G6A7_9FIRM
Toxin-antitoxin system, antitoxin component, HicB family {ECO:0000313|EMBL:EDR46668.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L2_021_251G1_scaffold_397_18
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9456..10820)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98288.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Predicted ATPase (AAA+ superfamily)
L2_021_251G1_scaffold_397_19
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10910..11383)
DNA (474bp) protein (158aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98287.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L2_021_251G1_scaffold_397_20
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11760..11978
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F4R0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE45340.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L2_021_251G1_scaffold_397_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12107..13051
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GUR5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91470.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_021_251G1_scaffold_397_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13088..13561
DNA (474bp) protein (158aa)
Uncharacterized protein n=6 Tax=root RepID=G1VJN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32186.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
conjugative transposon protein
L2_021_251G1_scaffold_397_23
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13558..15342
DNA (1785bp) protein (595aa)
Type IV secretory pathway, VirD4 components n=8 Tax=root RepID=D4L4J2_9FIRM
Type IV secretory pathway, VirD4 components
Uncharacterized protein {ECO:0000313|EMBL:EHO32187.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_021_251G1_scaffold_397_24
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15406..15564
DNA (159bp) protein (53aa)
Uncharacterized protein n=6 Tax=Clostridiales RepID=C0CYB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG55973.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_021_251G1_scaffold_397_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15719..15991
DNA (273bp) protein (91aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=C0FW42_9FIRM
XRE family transcriptional regulator {ECO:0000313|EMBL:ENZ59334.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_021_251G1_scaffold_397_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15951..16328
DNA (378bp) protein (126aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=C0FW41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENZ59333.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
Displaying 26 items

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