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L2_021_251G1_scaffold_557

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_557_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(334..630)
DNA (297bp) protein (99aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TNF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67205.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_021_251G1_scaffold_557_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

962..1918
DNA (957bp) protein (319aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TV83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK23946.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L2_021_251G1_scaffold_557_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1893..2720
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=3 Tax=Clostridiales RepID=F7JY22_9FIRM
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
L2_021_251G1_scaffold_557_4
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2732..3577
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000313|EMBL:CBK89197.1}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000313|EMBL:CBK89197.1};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
Pantothenate synthetase n=14 Tax=root RepID=C8WPL3_EGGLE
pantoate--beta-alanine ligase
L2_021_251G1_scaffold_557_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3591..3971
DNA (381bp) protein (127aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Aspartate 1-decarboxylase n=13 Tax=Bacteria RepID=C8WPL2_EGGLE
aspartate alpha-decarboxylase
L2_021_251G1_scaffold_557_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4405..5679)
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47230.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sucrose-6-phosphate hydrolase
L2_021_251G1_scaffold_557_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5873..6310
DNA (438bp) protein (146aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY26_9FIRM
L2_021_251G1_scaffold_557_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6307..7902
DNA (1596bp) protein (532aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY26_9FIRM
L2_021_251G1_scaffold_557_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8073..9530)
DNA (1458bp) protein (486aa)
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY27_9FIRM
Xylulokinase {ECO:0000313|EMBL:EGN47232.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_021_251G1_scaffold_557_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9546..11033)
DNA (1488bp) protein (496aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47233.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L-fucose isomerase and related proteins
L2_021_251G1_scaffold_557_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11067..11681)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47234.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_021_251G1_scaffold_557_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11814..12635)
DNA (822bp) protein (274aa)
Transcriptional regulator, AraC family n=2 Tax=Lachnospiraceae RepID=A7AZW1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47235.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
AraC-type DNA-binding domain-containing proteins
L2_021_251G1_scaffold_557_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12647..12934)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17232.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_021_251G1_scaffold_557_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12904..13440)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZW2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78789.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_021_251G1_scaffold_557_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13740..14336
DNA (597bp) protein (199aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Lachnospiraceae RepID=A7AZW4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47072.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L2_021_251G1_scaffold_557_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14359..14823)
DNA (465bp) protein (155aa)
SsrA-binding protein n=3 Tax=Clostridiales RepID=A7AZW5_RUMGN
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
SsrA-binding protein
L2_021_251G1_scaffold_557_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14854..16995)
DNA (2142bp) protein (714aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=2 Tax=Ruminococcus gnavus RepID=A7AZW6_RUMGN
L2_021_251G1_scaffold_557_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17096..17338)
DNA (243bp) protein (81aa)
Preprotein translocase, SecG subunit n=4 Tax=Clostridiales RepID=A7AZW7_RUMGN
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EDN78793.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
protein translocase, SecG subunit
L2_021_251G1_scaffold_557_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17556..17933)
DNA (378bp) protein (126aa)
Fibronectin type III domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TV70_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:CCZ67189.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_021_251G1_scaffold_557_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17930..18952)
DNA (1023bp) protein (341aa)
Fibronectin type III domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZW8_RUMGN
Fibronectin type III domain protein {ECO:0000313|EMBL:EDN78794.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
Displaying 20 items

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