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L2_022_000G1_scaffold_9673

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_9673_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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59..247
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp49 RepID=S2SIY3_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC90437.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
conjugative transposon protein
L2_022_000G1_scaffold_9673_2
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(371..730)
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LUI3_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFR37529.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Transcriptional regulator, HTH-type
L2_022_000G1_scaffold_9673_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1255..1674
DNA (420bp) protein (140aa)
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Clostridium difficile P38 RepID=T4PXW9_CLODI
Sigma-70, region 4 family protein {ECO:0000313|EMBL:EQE70020.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
DNA-directed RNA polymerase specialized sigma subunit
L2_022_000G1_scaffold_9673_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1678..1926
DNA (249bp) protein (83aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium difficile P38 RepID=T4Q3R5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEG30213.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L2_022_000G1_scaffold_9673_5
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2296..2499
DNA (204bp) protein (68aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=U3YV19_CLODI
Excisionase from transposon Tn916 {ECO:0000313|EMBL:EEG30212.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
xis; excisionase
Displaying 5 items

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