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L2_022_000G1_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 401 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_3_1
unknown

Not on your lists

comp(2..175)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_022_000G1_scaffold_3_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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191..781
DNA (591bp) protein (197aa)
Predicted metal-binding protein n=29 Tax=root RepID=D4IMZ6_9BACT
metal-binding protein
Putative metal-binding protein {ECO:0000313|EMBL:AFL78705.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000G1_scaffold_3_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2016..2228
DNA (213bp) protein (71aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=I3YNY5_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDO55587.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
L2_022_000G1_scaffold_3_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2832..3125
DNA (294bp) protein (98aa)
DNA binding domain, excisionase family n=2 Tax=Parabacteroides merdae RepID=A7ALF2_9PORP
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDN84199.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_022_000G1_scaffold_3_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3192..4403)
DNA (1212bp) protein (404aa)
Site-specific recombinase, phage integrase family n=2 Tax=Bacteroides RepID=A7V014_BACUN
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDO55590.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
site-specific recombinase XerD
L2_022_000G1_scaffold_3_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4431..5408)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6ACI1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN21265.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
putative phage integrase
L2_022_000G1_scaffold_3_7
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5907..6050
DNA (144bp) protein (48aa)
recombinase n=1 Tax=Alistipes onderdonkii RepID=UPI0003790618
Phage integrase {ECO:0000313|EMBL:CDM05661.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
putative bacteriophage integrase
L2_022_000G1_scaffold_3_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6137..7033
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRM9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26368.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000G1_scaffold_3_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7163..7450
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y4V8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26369.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
DNA binding domain, excisionase family
L2_022_000G1_scaffold_3_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7453..8499
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXK0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26370.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000G1_scaffold_3_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8615..9499
DNA (885bp) protein (295aa)
DNA primase (EC:2.7.7.-)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YCL4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26371.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_022_000G1_scaffold_3_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9751..11187
DNA (1437bp) protein (479aa)
Plasmid recombination enzyme n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z784_9BACT
Plasmid recombination enzyme {ECO:0000313|EMBL:CDD26372.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Plasmid recombination enzyme.
L2_022_000G1_scaffold_3_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11231..11869)
DNA (639bp) protein (213aa)
Conserved domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRN4_9BACT
Conserved domain protein {ECO:0000313|EMBL:CDD26373.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_022_000G1_scaffold_3_14
unknown

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11890..12018
DNA (129bp) protein (43aa)

This feature has no annotations

L2_022_000G1_scaffold_3_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12529..15519
DNA (2991bp) protein (997aa)
Helicase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXK4_9BACT
Helicase {ECO:0000313|EMBL:CDD26375.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
helicase
L2_022_000G1_scaffold_3_16
unknown

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comp(15546..15773)
DNA (228bp) protein (76aa)

This feature has no annotations

L2_022_000G1_scaffold_3_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16467..16712
DNA (246bp) protein (82aa)
HNH endonuclease n=1 Tax=Alistipes sp. CAG:29 RepID=R6YCM0_9BACT
HNH endonuclease {ECO:0000313|EMBL:CDD26376.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_022_000G1_scaffold_3_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16983..17348)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z790_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26377.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000G1_scaffold_3_19
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17658..18290)
DNA (633bp) protein (211aa)
haloacid dehalogenase n=1 Tax=Alistipes onderdonkii RepID=UPI00035ECAE7
Haloacid dehalogenase superfamily protein subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CCZ77327.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
haloacid dehalogenase superfamily protein
L2_022_000G1_scaffold_3_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18377..20890)
DNA (2514bp) protein (838aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000380C0CA
Uncharacterized protein {ECO:0000313|EMBL:CDD26246.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000G1_scaffold_3_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20980..21471
DNA (492bp) protein (164aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
cysteinyl-tRNA(Pro) deacylase n=1 Tax=Alistipes onderdonkii RepID=UPI000376E0C1
ybaK/ebsC protein
L2_022_000G1_scaffold_3_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21480..22574)
DNA (1095bp) protein (365aa)
glycosyltransferase family 1 n=1 Tax=Alistipes onderdonkii RepID=UPI00036435AE
Glycosyltransferase {ECO:0000313|EMBL:CDD26244.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycosyltransferase
L2_022_000G1_scaffold_3_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22579..23580)
DNA (1002bp) protein (334aa)
Putative acyltransferase 3 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRA5_9BACT
Putative acyltransferase 3 {ECO:0000313|EMBL:CDD26243.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000G1_scaffold_3_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23583..24653)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z6V1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26242.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Fe-S oxidoreductase
L2_022_000G1_scaffold_3_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24655..25836)
DNA (1182bp) protein (394aa)
Glycosyltransferase group 1 family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YC81_9BACT
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CDD26241.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycosyltransferase
L2_022_000G1_scaffold_3_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25899..26852)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XX70_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26240.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
putative glycosyltransferase
L2_022_000G1_scaffold_3_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26827..28149)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y4J1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26239.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_022_000G1_scaffold_3_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28157..28531)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRA1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26238.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transferase hexapeptide repeat containing protein
L2_022_000G1_scaffold_3_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28778..29746)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z6U6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26237.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000G1_scaffold_3_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29746..31023)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YC76_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26236.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycosyltransferase
Displaying items 1-30 of 401 in total

View Taxonomy