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L2_022_000G1_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_40_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7..1158)
DNA (1152bp) protein (384aa)
mtlD; mannitol-1-phosphate 5-dehydrogenase (EC:1.1.1.17)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Mannitol-1-phosphate 5-dehydrogenase n=29 Tax=Clostridium difficile RepID=Q185K5_CLOD6
L2_022_000G1_scaffold_40_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1177..1599)
DNA (423bp) protein (141aa)
Mannitol-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EQG75994.1}; EC=2.7.1.- {ECO:0000313|EMBL:EQG75994.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Mannitol-specific phosphotransferase enzyme IIA component n=155 Tax=Clostridium difficile RepID=C9XLB4_CLODC
mtlF; PTS system mannitol-specific transporter subunit IIA
L2_022_000G1_scaffold_40_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1629..3713)
DNA (2085bp) protein (695aa)
PRD domain protein n=38 Tax=Clostridium difficile RepID=T3GGB1_CLODC
mtlR; Transcription antiterminator, PTS operonregulator
Transcription antiterminator {ECO:0000313|EMBL:CKH28817.1}; Transcription antiterminator, PTS operonregulator {ECO:0000313|EMBL:CEJ98951.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_40_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3793..5217)
DNA (1425bp) protein (475aa)
mtlA; PTS system mannitol-specific transporter subunit IICB (EC:2.7.1.69)
PTS system, mannitol-specific IIC component family protein {ECO:0000313|EMBL:EQI81338.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQI81338.1};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
PTS system, mannitol-specific IIC component family protein n=39 Tax=Clostridium difficile RepID=T3GFA0_CLODC
L2_022_000G1_scaffold_40_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5813..7312
DNA (1500bp) protein (500aa)
inosine 5-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EQE61467.1}; EC=1.1.1.205 {ECO:0000313|EMBL:EQE61467.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Inosine-5'-monophosphate dehydrogenase n=166 Tax=Clostridium difficile RepID=C9XLB7_CLODC
L2_022_000G1_scaffold_40_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7397..8554)
DNA (1158bp) protein (386aa)
Toxic anion resistance protein TelA n=171 Tax=Clostridium difficile RepID=G6BZ76_CLODI
toxic anion resistance protein
Putative toxic anion resistance protein {ECO:0000313|EMBL:CAJ69223.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_40_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8669..9589)
DNA (921bp) protein (307aa)
5-bromo-4-chloroindolyl phosphate hydrolysis family protein n=78 Tax=Clostridium difficile RepID=T2TF44_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL30570.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_022_000G1_scaffold_40_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9876..10994)
DNA (1119bp) protein (373aa)
4hbD; 4-hydroxybutyrate dehydrogenase(4-hydroxybutanoate:NAD+ oxidoreductase) (EC:1.1.1.61)
4-hydroxybutyrate dehydrogenase(4-hydroxybutanoate:NAD+ oxidoreductase) {ECO:0000313|EMBL:CEJ98956.1}; EC=1.1.1.61 {ECO:0000313|EMBL:CEJ98956.1};; NAD-dependent 4-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:CKH28964.1}; EC=1.1.-.- {ECO:0000313|EMBL:CKH28964.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Iron-containing alcohol dehydrogenase family protein n=26 Tax=Clostridium difficile RepID=T3GHX7_CLODC
L2_022_000G1_scaffold_40_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11014..12321)
DNA (1308bp) protein (436aa)
4-hydroxybutyrate CoA transferase {ECO:0000313|EMBL:CDS85597.1}; EC=2.8.3.- {ECO:0000313|EMBL:CKH29005.1};; 4-hydroxybutyrate coenzyme A transferase {ECO:0000313|EMBL:CDS87788.1}; EC=2.8.3.- {ECO:0000313|EMBL:CDS87788.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
4-Hydroxybutyrate CoA-transferase n=133 Tax=Clostridium difficile RepID=C9XLC1_CLODC
4-hydroxybutyrate CoA transferase
L2_022_000G1_scaffold_40_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12345..12620)
DNA (276bp) protein (92aa)
Uncharacterized protein n=192 Tax=Clostridium difficile RepID=C9XLC2_CLODC
hypothetical protein
Acetyl-CoA hydrolase {ECO:0000313|EMBL:CKH29039.1}; Uncharacterised protein {ECO:0000313|EMBL:CEJ98958.1}; Uncharacterized protein {ECO:0000313|EMBL:CDT13079.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_40_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12755..14251)
DNA (1497bp) protein (499aa)
4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase n=212 Tax=Clostridium difficile RepID=C9XLC3_CLODC
abfD; gamma-aminobutyrate metabolism dehydratase/isomerase
Gamma-aminobutyrate metabolism dehydratase/isomerase {ECO:0000313|EMBL:EHJ25156.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_022_000G1_scaffold_40_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14444..15835)
DNA (1392bp) protein (464aa)
Succinate-semialdehyde dehydrogenase (NAD(P)+) {ECO:0000313|EMBL:CCL22668.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CCL22668.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Succinate-semialdehyde dehydrogenase n=174 Tax=Clostridium difficile RepID=C9XLC4_CLODC
succinate-semialdehyde dehydrogenase
L2_022_000G1_scaffold_40_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15866..17410)
DNA (1545bp) protein (515aa)
cat1; Succinyl-CoA:coenzyme A transferase (EC:2.8.3.-)
Succinyl-CoA:coenzyme A transferase {ECO:0000313|EMBL:CAJ69230.1}; EC=2.8.3.- {ECO:0000313|EMBL:CAJ69230.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Succinate CoA transferase family protein n=70 Tax=Clostridium difficile RepID=T3GHY1_CLODC
L2_022_000G1_scaffold_40_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17437..18840)
DNA (1404bp) protein (468aa)
AspT/YidE/YbjL antiporter duplication domain protein n=7 Tax=Clostridium difficile RepID=T2X2R7_CLODI
hypothetical protein
AspT/YidE/YbjL antiporter duplication domain protein {ECO:0000313|EMBL:EHJ27936.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_022_000G1_scaffold_40_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19257..20129
DNA (873bp) protein (291aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=193 Tax=Clostridium difficile RepID=C9XLC7_CLODC
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CAJ69232.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_40_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20316..20915)
DNA (600bp) protein (200aa)
Putative membrane protein n=64 Tax=Clostridium difficile RepID=Q185M0_CLOD6
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ69233.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_40_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21028..22107)
DNA (1080bp) protein (360aa)
proP; putative Xaa-Pro dipeptidase (EC:3.4.13.9)
Putative Xaa-Pro dipeptidase {ECO:0000313|EMBL:CCL30580.1}; EC=3.4.13.9 {ECO:0000313|EMBL:CCL30580.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Xaa-Pro dipeptidase n=96 Tax=Clostridium difficile RepID=T3GF58_CLODC
L2_022_000G1_scaffold_40_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22421..23566)
DNA (1146bp) protein (382aa)
Glycine/sarcosine/betaine reductase complex component C subunit alpha {ECO:0000313|EMBL:EQE61464.1}; EC=1.21.4.4 {ECO:0000313|EMBL:EQE61464.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Glycine/sarcosine/betaine reductase complex component C alpha subunit n=171 Tax=Clostridium difficile RepID=C9XLD0_CLODC
grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha
L2_022_000G1_scaffold_40_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23577..25109)
DNA (1533bp) protein (511aa)
grdC; glycine reductase complex component C subunit beta (EC:1.21.4.2)
Glycine/sarcosine/betaine reductase complex component C subunit beta {ECO:0000313|EMBL:EQG75099.1}; EC=1.21.4.4 {ECO:0000313|EMBL:EQG75099.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Glycine reductase complex component C subunit beta (Protein PC beta) n=198 Tax=Clostridium difficile RepID=Q185M4_CLOD6
L2_022_000G1_scaffold_40_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25365..25598)
DNA (234bp) protein (78aa)
Glycine reductase complex component B gamma subunit (Selenocysteine) n=424 Tax=Clostridium difficile RepID=Q185M3_CLOD6
glycine reductase complex component B gamma subunit
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase domain protein {ECO:0000313|EMBL:EHJ25165.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_022_000G1_scaffold_40_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25626..26675)
DNA (1050bp) protein (350aa)
Glycine reductase complex component B gamma subunit (Selenocysteine) n=424 Tax=Clostridium difficile RepID=Q185M3_CLOD6
glycine reductase complex component B gamma subunit
Glycine reductase, selenoprotein B {ECO:0000313|EMBL:EFH07830.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
L2_022_000G1_scaffold_40_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26707..27030)
DNA (324bp) protein (108aa)
Glycine/sarcosine/betaine reductase complex component A {ECO:0000313|EMBL:CCL30585.1}; EC=1.21.4.2 {ECO:0000313|EMBL:CCL30585.1};; EC=1.21.4.3 {ECO:0000313|EMBL:CCL30585.1};; EC=1.21.4.4 {ECO:0000313|EMBL:CCL30585.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Glycine/sarcosine/betaine reductase complex component A n=2 Tax=Clostridium difficile RepID=C9XLD3_CLODC
grdA; glycine/sarcosine/betaine reductase complex protein A
L2_022_000G1_scaffold_40_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27046..27180)
DNA (135bp) protein (45aa)
grdA; glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.2)
Glycine/sarcosine/betaine reductase complex component A {ECO:0000313|EMBL:EQE61474.1}; EC=1.21.4.4 {ECO:0000313|EMBL:EQE61474.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Glycine reductase complex selenoprotein A (Selenocysteine) n=429 Tax=Clostridium difficile RepID=Q185M6_CLOD6
L2_022_000G1_scaffold_40_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27292..28578)
DNA (1287bp) protein (429aa)
Glycine reductase complex component B subunits alpha and beta (Selenoprotein PB alpha/beta) {ECO:0000313|EMBL:CCL30587.1}; EC=1.21.4.2 {ECO:0000313|EMBL:CCL30587.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Glycine reductase complex component B alpha and beta subunits n=213 Tax=Clostridium difficile RepID=C9XLD4_CLODC
grdE; glycine reductase complex component B subunits alpha/beta
L2_022_000G1_scaffold_40_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28847..29164)
DNA (318bp) protein (106aa)
Thioredoxin n=221 Tax=Clostridium difficile RepID=C9XLD5_CLODC
trxA2; thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
L2_022_000G1_scaffold_40_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29262..30209)
DNA (948bp) protein (316aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Thioredoxin reductase n=205 Tax=Clostridium difficile RepID=C9XLD6_CLODC
trxB3; thioredoxin reductase
L2_022_000G1_scaffold_40_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30305..30796)
DNA (492bp) protein (164aa)
Uncharacterized protein n=201 Tax=Clostridium difficile RepID=G6BCL0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ25172.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
grdX; putative glycine reductase complex component
L2_022_000G1_scaffold_40_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31222..32916)
DNA (1695bp) protein (565aa)
Oligopeptidase n=27 Tax=Clostridium difficile RepID=T3GG50_CLODC
Oligoendopeptidase-related, clade2, M3B family
Oligoendopeptidase {ECO:0000313|EMBL:CKH29702.1}; Oligoendopeptidase-related, clade2, M3B family {ECO:0000313|EMBL:CEJ98974.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_40_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33409..34230
DNA (822bp) protein (274aa)
HAD superfamily hydrolase (EC:3.1.3.-)
Putative hydrolase, HAD superfamily, subfamily IIB {ECO:0000313|EMBL:CAJ69244.1}; EC=3.1.3.- {ECO:0000313|EMBL:CAJ69244.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
HAD hydrolase, IIB family protein n=107 Tax=Clostridium difficile RepID=T3GHN3_CLODC
L2_022_000G1_scaffold_40_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34367..34516)
DNA (150bp) protein (50aa)
Uncharacterized protein n=127 Tax=Clostridium difficile RepID=T3GG09_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22686.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Displaying items 1-30 of 185 in total

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