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L2_022_000G1_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 155 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_52_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(91..990)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HS99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32600.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
sugar ABC transporter permease
L2_022_000G1_scaffold_52_2
Paenibacillus sp. FSL P4-0081, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1003..1911)
DNA (909bp) protein (303aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B133_9CLOT
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AIQ31538.1}; TaxID=1536769 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL P4-0081.;"
L2_022_000G1_scaffold_52_3
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1993..3552)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00037B05A2
family 1 extracellular solute-binding protein
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:AFC28916.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
L2_022_000G1_scaffold_52_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3713..4510)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HXJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32879.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
yesN4; hypothetical protein
L2_022_000G1_scaffold_52_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4507..6153)
DNA (1647bp) protein (549aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSY4_9FIRM
HAMP domain-containing sensor
L2_022_000G1_scaffold_52_6
unknown

Not on your lists

6724..7302
DNA (579bp) protein (193aa)

This feature has no annotations

L2_022_000G1_scaffold_52_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7592..8482)
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ALG8_9CLOT
hypothetical protein
L2_022_000G1_scaffold_52_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8609..10147)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W5A6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98064.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
AraC family transcriptional regulator
L2_022_000G1_scaffold_52_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10144..12081)
DNA (1938bp) protein (646aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
signal transduction protein (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W4Z5_9CLOT
L2_022_000G1_scaffold_52_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12195..13607)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35075.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_022_000G1_scaffold_52_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13861..14760
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35076.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter permease
L2_022_000G1_scaffold_52_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14776..16137
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35077.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_022_000G1_scaffold_52_13
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16314..18506)
DNA (2193bp) protein (731aa)
Alpha-L-rhamnosidase protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CBP0_9CLOT
Alpha-L-rhamnosidase protein {ECO:0000313|EMBL:ERI66677.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
alpha-L-rhamnosidase
L2_022_000G1_scaffold_52_14
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18635..19822)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4G8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66678.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_000G1_scaffold_52_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20121..21440
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B365_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66680.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
transporter
L2_022_000G1_scaffold_52_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21450..22055
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CH77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66681.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_000G1_scaffold_52_17
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22181..23560)
DNA (1380bp) protein (460aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Beta-galactosidase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CBP5_9CLOT
beta-galactosidase
L2_022_000G1_scaffold_52_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23605..24711)
DNA (1107bp) protein (369aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4H6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66683.1}; Flags: Fragment;; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
putative lipoprotein
L2_022_000G1_scaffold_52_19
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24764..27409)
DNA (2646bp) protein (882aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ALG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66669.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
glycoside hydrolase
L2_022_000G1_scaffold_52_20
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27912..30929
DNA (3018bp) protein (1006aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66673.1}; Flags: Fragment;; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_000G1_scaffold_52_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31048..31671)
DNA (624bp) protein (208aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CQQ1_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERI69641.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
transcriptional regulator
L2_022_000G1_scaffold_52_22
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31820..33037)
DNA (1218bp) protein (406aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CK79_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERI69642.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
permease multidrug-efflux transporter
L2_022_000G1_scaffold_52_23
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33220..34053)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BCV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69643.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_022_000G1_scaffold_52_24
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34050..36389)
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AUX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69644.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
alpha-L-fucosidase
L2_022_000G1_scaffold_52_25
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36491..38212)
DNA (1722bp) protein (574aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BBS6_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI69645.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC transporter substrate-binding protein
L2_022_000G1_scaffold_52_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38297..39214)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CQQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69646.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
CUT1 family carbohydrate ABC transporter membrane protein 2
L2_022_000G1_scaffold_52_27
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39225..40199)
DNA (975bp) protein (325aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CK84_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI69647.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
CUT1 family carbohydrate ABC transporter membrane protein 1
L2_022_000G1_scaffold_52_28
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40421..41443
DNA (1023bp) protein (341aa)
transcriptional regulator, LacI family (EC:5.1.1.1)
Sugar-binding domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BCV5_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:ERI69648.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_022_000G1_scaffold_52_29
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41525..41716)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AUX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69649.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_000G1_scaffold_52_30
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41716..42846)
DNA (1131bp) protein (377aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BBT2_9CLOT
Displaying items 1-30 of 155 in total

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