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L2_022_000G1_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_137_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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145..828
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z335_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91467.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted ATP-dependent endonuclease of the OLD family
L2_022_000G1_scaffold_137_2
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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825..1667
DNA (843bp) protein (281aa)
4Fe-4S ferredoxin n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMI1_CLOPA
4Fe-4S ferredoxin
Putative Fe-S protein {ECO:0000313|EMBL:AGK95785.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_022_000G1_scaffold_137_3
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1830..3875
DNA (2046bp) protein (682aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LGF2_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDB84910.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Molecular chaperone, HSP90 family
L2_022_000G1_scaffold_137_4
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3991..4482)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG74677.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L2_022_000G1_scaffold_137_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4662..5480
DNA (819bp) protein (273aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Pseudouridine synthase n=2 Tax=Lachnospiraceae RepID=F7JNV3_9FIRM
pseudouridine synthase
L2_022_000G1_scaffold_137_6
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5477..7459
DNA (1983bp) protein (661aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALY2_9FIRM
L2_022_000G1_scaffold_137_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7462..8148
DNA (687bp) protein (229aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Clostridium RepID=B6FUJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23510.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative transcriptional regulator
L2_022_000G1_scaffold_137_8
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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8311..8625
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GF25_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
thioredoxin
L2_022_000G1_scaffold_137_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8726..10201
DNA (1476bp) protein (492aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV45_9FIRM
ATP-dependent Clp protease, ATP-binding subunit ClpX {ECO:0000313|EMBL:EGN34814.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L2_022_000G1_scaffold_137_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10262..11953
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJ27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23515.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Subtilase family.
L2_022_000G1_scaffold_137_11
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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11967..12254
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W883_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07313.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_022_000G1_scaffold_137_12
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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12261..12773
DNA (513bp) protein (171aa)
Lipoprotein signal peptidase (EC:3.4.23.36)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XIM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15348.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L2_022_000G1_scaffold_137_13
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(12733..13671)
DNA (939bp) protein (313aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.272)
Lactate dehydrogenase and related dehydrogenases n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YFE4_9FIRM
Lactate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CDA15277.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L2_022_000G1_scaffold_137_14
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13864..14721
DNA (858bp) protein (286aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LA00_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC10946.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L2_022_000G1_scaffold_137_15
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14790..16010)
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Dorea sp. CAG:105 RepID=R5D3V9_9FIRM
L2_022_000G1_scaffold_137_16
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16175..16849
DNA (675bp) protein (225aa)
Subtilin biosynthesis regulatory protein SpaR n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6N8P8_9FIRM
Subtilin biosynthesis regulatory protein SpaR {ECO:0000313|EMBL:CDC08408.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
two-component response regulator
L2_022_000G1_scaffold_137_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16837..18042
DNA (1206bp) protein (402aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KRH7_9FIRM
integral membrane sensor signal transduction histidine kinase
L2_022_000G1_scaffold_137_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18124..19029
DNA (906bp) protein (302aa)
ABC transporter, drug exporter-1 (DrugE1) family, ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0Z1A3_9CLOT
ABC transporter, drug exporter-1 (DrugE1) family, ATP-binding protein {ECO:0000313|EMBL:EGB92205.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter ATP-binding protein
L2_022_000G1_scaffold_137_19
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19010..20296
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4D8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72931.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative membrane protein
L2_022_000G1_scaffold_137_20
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20301..20852
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NB34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80510.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
ABC transporter permease
L2_022_000G1_scaffold_137_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20975..21331
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q4S3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22876.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_022_000G1_scaffold_137_22
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21716..23044
DNA (1329bp) protein (443aa)
tRNA synthetase class II (D K and N) n=1 Tax=Blautia sp. CAG:37 RepID=R7JXA6_9FIRM
Nondiscriminating aspartyl-tRNA synthetase {ECO:0000313|EMBL:EXG84991.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
tRNA synthetase class II (D K and N)
L2_022_000G1_scaffold_137_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23187..24755
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22497.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cellulosome anchoring protein cohesin subunit
L2_022_000G1_scaffold_137_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24945..26771
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Clostridium RepID=B6FJ69_9CLOT
L2_022_000G1_scaffold_137_25
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26902..28182
DNA (1281bp) protein (427aa)
Trypsin n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BAW6_9FIRM
Trypsin {ECO:0000313|EMBL:EEG89240.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L2_022_000G1_scaffold_137_26
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28321..28608
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B819_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80630.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L2_022_000G1_scaffold_137_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28708..29109)
DNA (402bp) protein (134aa)
CotJC protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3V3_9CLOT
CotJC protein {ECO:0000313|EMBL:EGB91367.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Mn-containing catalase
L2_022_000G1_scaffold_137_28
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(29106..30014)
DNA (909bp) protein (303aa)
Recombinase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MG21_9FIRM
Recombinase {ECO:0000313|EMBL:CDB97520.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
recombinase
L2_022_000G1_scaffold_137_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30406..30912)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJ59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22486.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Mn-containing catalase
L2_022_000G1_scaffold_137_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30916..31185)
DNA (270bp) protein (90aa)
CotJB protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3V4_9CLOT
CotJB protein {ECO:0000313|EMBL:EGB91368.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
Displaying items 1-30 of 111 in total

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