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L2_022_000G1_scaffold_164

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_164_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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114..563
DNA (450bp) protein (150aa)
Lysophospholipase L2 domain protein n=1 Tax=Clostridium difficile DA00183 RepID=T3RCQ5_CLODI
Group I intron
Alpha/beta hydrolase {ECO:0000313|EMBL:CKH07161.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_164_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1036..2250
DNA (1215bp) protein (405aa)
Transcriptional regulator, HTH-type n=24 Tax=Clostridium difficile RepID=Q186C7_CLOD6
Transcriptional regulator, HTH-type
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CAJ68437.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_164_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2599..3120)
DNA (522bp) protein (174aa)
Acetyltransferase domain protein n=63 Tax=Clostridium difficile RepID=T3H9B2_CLODC
conserved hypothetical protein
Acetyltransferase {ECO:0000313|EMBL:CKH07205.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98164.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_164_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3476..4273
DNA (798bp) protein (266aa)
3D domain protein n=37 Tax=Clostridium difficile RepID=T3HB68_CLODC
putative g5 domain protein
3D domain protein {ECO:0000313|EMBL:EQE65888.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_022_000G1_scaffold_164_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4383..4973
DNA (591bp) protein (197aa)
GDSL-like Lipase/Acylhydrolase family protein n=145 Tax=Clostridium difficile RepID=T3H904_CLODC
putative esterase, SGNH hydrolase-type
Putative esterase, SGNH hydrolase-type {ECO:0000313|EMBL:CAJ68440.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_164_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4985..6736
DNA (1752bp) protein (584aa)
Alpha-phosphoglucomutase {ECO:0000313|EMBL:CCL21717.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CCL21717.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Phosphoglucomutase n=158 Tax=Clostridium difficile RepID=T3H7L1_CLODC
pgm1; phosphoglucomutase
L2_022_000G1_scaffold_164_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6950..7789
DNA (840bp) protein (280aa)
membrane-associated ribonuclease (EC:3.1.-.-)
Putative membrane-associated ribonuclease BN-like (Rbn) {ECO:0000313|EMBL:CAJ68442.1}; EC=3.1.-.- {ECO:0000313|EMBL:CAJ68442.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
YihY family inner membrane domain protein n=26 Tax=Clostridium difficile RepID=T3H8Z9_CLODC
L2_022_000G1_scaffold_164_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8306..10162
DNA (1857bp) protein (619aa)
Two-component sensor histidinekinase,sporulation-associated spo0A (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Two-component sensor histidine kinase,sporulation-associated spo0A n=168 Tax=Clostridium difficile RepID=Q186D3_CLOD6
L2_022_000G1_scaffold_164_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10871..12088
DNA (1218bp) protein (406aa)
hom2; Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Homoserine dehydrogenase n=26 Tax=Clostridium difficile RepID=Q186D4_CLOD6
L2_022_000G1_scaffold_164_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12205..12687
DNA (483bp) protein (161aa)
Uncharacterized protein n=148 Tax=Clostridium difficile RepID=T3H5W2_CLODC
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:EQE65890.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_022_000G1_scaffold_164_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12975..14240
DNA (1266bp) protein (422aa)
hisD; Histidinol dehydrogenase (HDH) (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Histidinol dehydrogenase n=6 Tax=Clostridium difficile RepID=T3HAP5_CLODC
L2_022_000G1_scaffold_164_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14443..15195)
DNA (753bp) protein (251aa)
Alpha/beta hydrolase fold family protein n=39 Tax=Clostridium difficile RepID=T3HB16_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68447.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_164_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15313..15582)
DNA (270bp) protein (90aa)
Uncharacterized protein n=118 Tax=Clostridium difficile RepID=C9XJB0_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29782.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_022_000G1_scaffold_164_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16057..17151
DNA (1095bp) protein (365aa)
ROK family protein n=41 Tax=Clostridium difficile RepID=T3H8V5_CLODC
Transcriptional regulator, repressor ROK family
Transcriptional regulator, repressor ROK family {ECO:0000313|EMBL:CCL29783.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_022_000G1_scaffold_164_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17153..18103
DNA (951bp) protein (317aa)
putative N-acetylglucosamine kinase NAGK-like (EC:2.7.1.59)
N-acetylglucosamine kinase {ECO:0000313|EMBL:CKH07497.1}; Putative N-acetylglucosamine kinase NAGK-like {ECO:0000313|EMBL:CEJ98176.1}; EC=2.7.1.59 {ECO:0000313|EMBL:CEJ98176.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
BadF/BadG/BcrA/BcrD ATPase family protein n=6 Tax=Clostridium difficile RepID=T3H7F6_CLODC
L2_022_000G1_scaffold_164_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18096..19280
DNA (1185bp) protein (395aa)
Uncharacterized protein n=19 Tax=Clostridium difficile RepID=T3H5W7_CLODC
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH07520.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98177.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_164_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19293..20789
DNA (1497bp) protein (499aa)
sugar family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=9 Tax=Clostridium difficile RepID=T3HAP9_CLODC
ABC transporter family protein {ECO:0000313|EMBL:EQH99994.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_022_000G1_scaffold_164_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20812..21762
DNA (951bp) protein (317aa)
Branched-chain amino acid transport system / permease component family protein n=26 Tax=Clostridium difficile RepID=T3HB21_CLODC
ABC-type transport system, sugar-familypermease
ABC-type transport system, sugar-family permease {ECO:0000313|EMBL:CAJ68453.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_164_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21783..22745
DNA (963bp) protein (321aa)
Periplasmic binding s and sugar binding domain of LacI family protein n=137 Tax=Clostridium difficile RepID=C9XJB6_CLODC
ribose ABC transporter substrate-binding protein
ABC-type transport system, sugar-family extracellular solute-binding protein {ECO:0000313|EMBL:CDS87122.1}; ABC-type transport system, sugar-familyextracellular solute-binding protein {ECO:0000313|EMBL:CEJ98180.1}; Putative ribose ABC transporter, substrate-binding lipoprotein {ECO:0000313|EMBL:CDS86814.1}; Ribose ABC transporter substrate-binding protein {ECO:0000313|EMBL:CKH07618.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_164_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23117..23749
DNA (633bp) protein (211aa)
Uncharacterized protein n=198 Tax=Clostridium difficile RepID=D5Q6Q9_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCK97924.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L2_022_000G1_scaffold_164_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24056..24151
DNA (96bp) protein (32aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=U3UP29_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK90404.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
L2_022_000G1_scaffold_164_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24299..25975
DNA (1677bp) protein (559aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
kdpA; Potassium-translocating ATPase A chain (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=28 Tax=Clostridium difficile RepID=Q186E7_CLOD6
L2_022_000G1_scaffold_164_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26000..28057
DNA (2058bp) protein (686aa)
kdpB; Potassium-transporting ATPase B chain (EC:3.6.3.12)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Potassium-transporting ATPase B chain n=193 Tax=Clostridium difficile RepID=Q186E6_CLOD6
L2_022_000G1_scaffold_164_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28076..28702
DNA (627bp) protein (209aa)
kdpC; Potassium-transporting ATPase C chain (EC:3.6.3.12)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Potassium-transporting ATPase C chain n=67 Tax=Clostridium difficile RepID=ATKC_CLOD6
L2_022_000G1_scaffold_164_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28939..29847
DNA (909bp) protein (303aa)
O-acetyl-serine thiol-lyase A (O-acetyl-sulfhydrylase)(OAS-TL) {ECO:0000313|EMBL:CCL21738.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CCL21738.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Cysteine synthase A n=170 Tax=Clostridium difficile RepID=C9XKX8_CLODC
putative O-acetylserine sulfhydrylase
L2_022_000G1_scaffold_164_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29874..30464
DNA (591bp) protein (197aa)
cysE; Serine acetyltransferase (SAT) (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Serine acetyltransferase n=200 Tax=Clostridium difficile RepID=T3H7G6_CLODC
L2_022_000G1_scaffold_164_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30624..30812
DNA (189bp) protein (63aa)
Ferredoxin n=212 Tax=Clostridium difficile RepID=T3H5X5_CLODC
Ferredoxin
Ferredoxin {ECO:0000313|EMBL:CCL21740.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_022_000G1_scaffold_164_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30866..31735)
DNA (870bp) protein (290aa)
map2; Methionine aminopeptidase Map2 (MAP) (PeptidaseM) (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Methionine aminopeptidase n=130 Tax=Clostridium difficile RepID=T3HAQ9_CLODC
L2_022_000G1_scaffold_164_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31932..33182)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=Q186F3_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ98189.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_164_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33467..33778
DNA (312bp) protein (104aa)
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=T2U194_CLODI
endonuclease
Uncharacterized protein {ECO:0000313|EMBL:EQI85077.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Displaying items 1-30 of 93 in total

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