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L2_022_000G1_scaffold_176

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_176_1
unknown

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3..461
DNA (459bp) protein (153aa)

This feature has no annotations

L2_022_000G1_scaffold_176_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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419..2209
DNA (1791bp) protein (597aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4X5_9CLOT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
bacterial translation initiation factor 2 (bIF-2)
L2_022_000G1_scaffold_176_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2283..2627
DNA (345bp) protein (115aa)
Ribosome-binding factor A n=1 Tax=Clostridium sp. CAG:7 RepID=R5IP80_9CLOT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ribosome-binding factor A
L2_022_000G1_scaffold_176_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2628..3596
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EZ54_9CLOT
Phosphoesterase RecJ protein {ECO:0000313|EMBL:ENZ15588.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Exopolyphosphatase-related proteins
L2_022_000G1_scaffold_176_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3597..4553
DNA (957bp) protein (319aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. CAG:7 PF8_9CLOT">RepID=R5IPF8_9CLOT
tRNA pseudouridine synthase B
L2_022_000G1_scaffold_176_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4550..5494
DNA (945bp) protein (315aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Riboflavin biosynthesis protein RibF n=4 Tax=Clostridium RepID=N9XK50_9CLOT
riboflavin biosynthesis protein RibF
L2_022_000G1_scaffold_176_7
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5660..5926
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=19 Tax=Clostridiales RepID=A8RZ95_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
30S ribosomal protein S15
L2_022_000G1_scaffold_176_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6204..8297
DNA (2094bp) protein (698aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQR8_9FIRM
L2_022_000G1_scaffold_176_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8428..9876
DNA (1449bp) protein (483aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUJ8_9CLOT
L2_022_000G1_scaffold_176_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9878..11734
DNA (1857bp) protein (619aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPG5_9CLOT
UvrD/REP helicase
L2_022_000G1_scaffold_176_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11735..12292
DNA (558bp) protein (186aa)
ATP:corrinoid adenosyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XJS5_9CLOT
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ENZ15596.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L2_022_000G1_scaffold_176_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12374..12694
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4P2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43986.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Protein of unknown function (DUF1292).
L2_022_000G1_scaffold_176_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12948..14759
DNA (1812bp) protein (604aa)
Putative protease CspB n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJG5_9FIRM
Putative protease CspB {ECO:0000313|EMBL:EEQ56740.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
peptidase S8 and S53 subtilisin kexin sedolisin
L2_022_000G1_scaffold_176_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14884..15813)
DNA (930bp) protein (310aa)
LacI family transcriptional regulator n=3 Tax=Clostridium RepID=N9Z4F0_9CLOT
LacI family transcriptional regulator {ECO:0000313|EMBL:ENZ51605.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
LacI family transcriptional regulator
L2_022_000G1_scaffold_176_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15967..17088
DNA (1122bp) protein (374aa)
Glycosyl hydrolase n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZDM4_9CLOT
Glycosyl hydrolase {ECO:0000313|EMBL:ENZ37960.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Glycoside Hydrolase Family 105-like unsaturated rhamnogalacturonyl hydrolase
L2_022_000G1_scaffold_176_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17119..18141)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJ61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58481.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Transcriptional regulators
L2_022_000G1_scaffold_176_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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18369..19178
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJ62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58482.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_022_000G1_scaffold_176_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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19154..19945
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJ63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58483.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_022_000G1_scaffold_176_19
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19996..21096
DNA (1101bp) protein (367aa)
NMT1/THI5-like protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AJL3_9CLOT
Putative taurine ABC transporter taurine-binding protein {ECO:0000313|EMBL:CCZ62940.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_022_000G1_scaffold_176_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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21193..22020
DNA (828bp) protein (276aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJ69_9CLOT
6-phosphogluconolactonase/Glucosamine-6-phosphateisomerase/deaminase
L2_022_000G1_scaffold_176_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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22077..23267
DNA (1191bp) protein (397aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
6-phosphofructokinase (EC:2.7.1.11)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJ66_9CLOT
L2_022_000G1_scaffold_176_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23264..24139
DNA (876bp) protein (292aa)
Triosephosphate isomerase (EC:5.3.1.1)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8S2R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13346.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_022_000G1_scaffold_176_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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24193..25644
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XDU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97862.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Protein of unknown function DUF2088
L2_022_000G1_scaffold_176_24
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25635..26792
DNA (1158bp) protein (386aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TBD2_9CLOT
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CCZ62938.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L2_022_000G1_scaffold_176_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26969..27475
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ING8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43708.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_022_000G1_scaffold_176_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27565..28734
DNA (1170bp) protein (390aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITQ4_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L2_022_000G1_scaffold_176_27
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29090..31099
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INP4_9CLOT
Chaperone protein HtpG {ECO:0000313|EMBL:KJJ69568.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Molecular chaperone, HSP90 family
L2_022_000G1_scaffold_176_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31246..32769
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3U9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43711.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_022_000G1_scaffold_176_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32911..33771
DNA (861bp) protein (287aa)
DegV family EDD domain-containing protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B0T1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13460.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
degV family protein
L2_022_000G1_scaffold_176_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33786..34925
DNA (1140bp) protein (380aa)
Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZDE5_9CLOT
Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) {ECO:0000313|EMBL:ENZ37891.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
capsule synthesis protein CapA
Displaying items 1-30 of 89 in total

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