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L2_022_000G1_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_238_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..868
DNA (867bp) protein (289aa)
Uncharacterized protein n=11 Tax=Clostridium difficile RepID=G6BBQ9_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEJ98408.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_238_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1304..1870
DNA (567bp) protein (189aa)
Bacterial stress family protein n=160 Tax=Clostridium difficile RepID=C9XRX8_CLODC
tellurium resistance protein
Tellurium resistance protein {ECO:0000313|EMBL:CCL30009.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_022_000G1_scaffold_238_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1910..2491
DNA (582bp) protein (194aa)
General stress protein 16U n=187 Tax=Clostridium difficile RepID=C9XRX7_CLODC
tellurium resistance protein
Tellurium resistance protein {ECO:0000313|EMBL:CBE04445.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_022_000G1_scaffold_238_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2548..3465)
DNA (918bp) protein (306aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=166 Tax=Clostridium difficile RepID=C9XRD5_CLODC
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCL30007.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_022_000G1_scaffold_238_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3595..5226
DNA (1632bp) protein (544aa)
Coenzyme A disulfide reductase (CoA-disulfide reductase) (CoADR) {ECO:0000313|EMBL:CAJ68667.1}; EC=1.8.1.14 {ECO:0000313|EMBL:CAJ68667.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Coenzyme A disulfide reductase (CoA-disulfide reductase) (CoADR) n=93 Tax=Clostridium difficile RepID=Q187A7_CLOD6
pyridine nucleotide-disulfide oxidoreductase
L2_022_000G1_scaffold_238_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5229..6176
DNA (948bp) protein (316aa)
4Fe-4S binding domain protein n=187 Tax=Clostridium difficile RepID=G6BBQ4_CLODI
nitrite and sulfite reductase subunit
Putative nitrite and sulfite reductase subunit {ECO:0000313|EMBL:CAJ68666.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_238_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6452..6715)
DNA (264bp) protein (88aa)
Uncharacterized protein n=147 Tax=Clostridium difficile RepID=C9XRD2_CLODC
hypothetical protein
Domain of uncharacterised function (DUF1883) {ECO:0000313|EMBL:CKH13020.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98402.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_238_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6814..7059)
DNA (246bp) protein (82aa)
Uncharacterized protein n=148 Tax=Clostridium difficile RepID=C9XRD1_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG75626.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_022_000G1_scaffold_238_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7188..7283)
DNA (96bp) protein (32aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium difficile CD39 RepID=T2X6K8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFH07015.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
L2_022_000G1_scaffold_238_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7484..7852)
DNA (369bp) protein (123aa)
C_GCAxxG_C_C family protein n=185 Tax=Clostridium difficile RepID=T3GTL1_CLODC
hypothetical protein
C GCAxxG C C family protein subfamily {ECO:0000313|EMBL:CKH12975.1}; Putative oxidoreductase {ECO:0000313|EMBL:CEJ98400.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_238_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8295..9251
DNA (957bp) protein (319aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
Polysaccharide biosynthesis family protein n=121 Tax=Clostridium difficile RepID=T3GVN2_CLODC
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EHJ24799.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_022_000G1_scaffold_238_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9469..9816
DNA (348bp) protein (116aa)
Uncharacterized protein n=207 Tax=Clostridium difficile RepID=C9XRC8_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE64887.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_022_000G1_scaffold_238_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9856..10830
DNA (975bp) protein (325aa)
Exonuclease family protein n=14 Tax=Clostridium difficile RepID=T2U2C5_CLODI
putative exonuclease
Putative exonuclease {ECO:0000313|EMBL:CEJ98397.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_238_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10936..11595
DNA (660bp) protein (220aa)
Uncharacterized protein n=181 Tax=Clostridium difficile RepID=T3GSN8_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29998.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_022_000G1_scaffold_238_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11598..11978
DNA (381bp) protein (127aa)
Uncharacterized protein n=196 Tax=Clostridium difficile RepID=Q186Z7_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQH99469.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_022_000G1_scaffold_238_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12067..13230)
DNA (1164bp) protein (388aa)
MerR regulatory family protein n=6 Tax=Clostridium difficile RepID=T3GWC0_CLODC
Transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CAJ68657.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_238_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13338..14384)
DNA (1047bp) protein (349aa)
A predicted NlpC/p60-like peptidase family protein n=10 Tax=Clostridium difficile RepID=T3GVQ1_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68656.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_238_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14631..15830)
DNA (1200bp) protein (400aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Argininosuccinate synthase n=181 Tax=Clostridium difficile RepID=ASSY_CLOD6
argG; argininosuccinate synthase
L2_022_000G1_scaffold_238_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16401..17138)
DNA (738bp) protein (246aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
tRNA pseudouridine synthase A n=186 Tax=Clostridium difficile RepID=C9XR59_CLODC
truA2; tRNA pseudouridine synthase A
L2_022_000G1_scaffold_238_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17160..18593)
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Two-component sensor histidine kinase n=214 Tax=Clostridium difficile RepID=C9XR58_CLODC
two-component sensor histidine kinase
L2_022_000G1_scaffold_238_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18596..19294)
DNA (699bp) protein (233aa)
Two-component response regulator n=181 Tax=Clostridium difficile RepID=Q186Z2_CLOD6
Two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CEJ98389.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_238_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19323..20711)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=133 Tax=Clostridium difficile RepID=G6BXP1_CLODI
putative lipoprotein
Lipoprotein {ECO:0000313|EMBL:CKH12689.1}; Putative lipoprotein {ECO:0000313|EMBL:CEJ98388.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_022_000G1_scaffold_238_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20855..22003)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=188 Tax=Clostridium difficile RepID=D5Q4X3_CLODI
methylase
Putative methylase {ECO:0000313|EMBL:CCL29989.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_022_000G1_scaffold_238_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22058..22876)
DNA (819bp) protein (273aa)
TIGR00268 family protein n=24 Tax=Clostridium difficile RepID=G6BXP3_CLODI
hypothetical protein
TIGR00268 family protein {ECO:0000313|EMBL:EFH15794.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
L2_022_000G1_scaffold_238_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23147..23848)
DNA (702bp) protein (234aa)
Uncharacterized protein n=137 Tax=Clostridium difficile RepID=T3GW78_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE64869.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_022_000G1_scaffold_238_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24284..24646)
DNA (363bp) protein (121aa)
Transcriptional regulator, Spx/MgsR family n=200 Tax=Clostridium difficile RepID=G6BPB6_CLODI
arsenate reductase
Transcriptional regulator, Spx/MgsR family protein {ECO:0000313|EMBL:EQE64865.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_022_000G1_scaffold_238_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24945..25616)
DNA (672bp) protein (224aa)
ABC-type transport system, aminoacid-family ATP-binding protein {ECO:0000313|EMBL:CCK86912.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCK86912.1};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
ABC transporter family protein n=211 Tax=Clostridium difficile RepID=C9XR51_CLODC
amino acid ABC transporter ATP-binding protein
L2_022_000G1_scaffold_238_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25648..26259)
DNA (612bp) protein (204aa)
Amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein n=214 Tax=Clostridium difficile RepID=C9XR50_CLODC
amino acid ABC transporter permease
ABC-type transport system, aminoacid-family permease {ECO:0000313|EMBL:CCL29984.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_022_000G1_scaffold_238_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26297..27100)
DNA (804bp) protein (268aa)
Bacterial extracellular solute-binding s, 3 family protein n=149 Tax=Clostridium difficile RepID=T3GTT4_CLODC
ABC-type transport system, aminoacid-familyextracellular solute-binding protein
ABC-type transport system, aminoacid-family extracellular solute-binding protein {ECO:0000313|EMBL:CAJ68644.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_022_000G1_scaffold_238_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27574..28881)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=16 Tax=Clostridium difficile RepID=T3GV48_CLODC
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH12498.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98380.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Displaying items 1-30 of 90 in total

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