ggKbase home page

L2_022_000G1_scaffold_306

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_306_1
unknown

Not on your lists

1..69
DNA (69bp) protein (23aa)
hypothetical protein
L2_022_000G1_scaffold_306_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

355..660
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74425.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_022_000G1_scaffold_306_3
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

663..2135
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B5T5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO31696.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_022_000G1_scaffold_306_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2756..4105
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74422.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_022_000G1_scaffold_306_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4364..4549
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74421.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_022_000G1_scaffold_306_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4653..6275
DNA (1623bp) protein (541aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=I7ASY2_ENTFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHM90819.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_000G1_scaffold_306_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6287..6709)
DNA (423bp) protein (141aa)
YqaJ viral recombinase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFY0_9FIRM
YqaJ viral recombinase family protein {ECO:0000313|EMBL:EFQ07899.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
putative phage-type endonuclease
L2_022_000G1_scaffold_306_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6706..7044)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAD1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01794.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_022_000G1_scaffold_306_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7055..7990)
DNA (936bp) protein (312aa)
Phage/plasmid-related protein TIGR03299 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAD0_9FIRM
phage/plasmid-related protein TIGR03299
Phage/plasmid-related protein TIGR03299 {ECO:0000313|EMBL:CBL01793.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_022_000G1_scaffold_306_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8020..8112)
DNA (93bp) protein (31aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SBQ1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00631.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_022_000G1_scaffold_306_11
GWE2_Clostridiales_32_10_curated, Clostridiales, Bacteria

Not on your lists

8481..9515
DNA (1035bp) protein (345aa)
AAA+ family ATPase id=1819550 bin=GWE2_Clostridiales_32_10 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
hypothetical protein
Tax=GWE2_Clostridiales_32_10_curated
L2_022_000G1_scaffold_306_12
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9516..11744
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y3E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL02577.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
ATPase AAA
L2_022_000G1_scaffold_306_13
Vibrio parahaemolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11758..12000
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Shewanella baltica (strain OS195) RepID=A9KZQ3_SHEB9
Uncharacterized protein {ECO:0000313|EMBL:KJR35999.1}; TaxID=670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio parahaemolyticus.;"
hypothetical protein
L2_022_000G1_scaffold_306_14
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12090..12980)
DNA (891bp) protein (297aa)
Uncharacterized conserved protein n=3 Tax=Clostridium RepID=D6DL95_CLOSC
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY83177.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L2_022_000G1_scaffold_306_15
Streptococcus sp. SR1, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13850..14581)
DNA (732bp) protein (244aa)
Glycosyl transferase family protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1SIY5_9LACO
Putative capsular biosynthesis protein {ECO:0000313|EMBL:EUC80507.1}; TaxID=1161416 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. SR1.;"
glycosyl transferase family protein
L2_022_000G1_scaffold_306_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14989..16305)
DNA (1317bp) protein (439aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL2_9FIRM
L2_022_000G1_scaffold_306_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16481..17761
DNA (1281bp) protein (427aa)
UPF0597 protein HMPREF9436_00447 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL4_9FIRM
UPF0597 protein HMPREF9436_00447 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_000G1_scaffold_306_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17897..18595
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ08036.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_022_000G1_scaffold_306_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18595..20115
DNA (1521bp) protein (507aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL6_9FIRM
Signal transduction histidine kinase
L2_022_000G1_scaffold_306_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20544..21194
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL7_9FIRM
L2_022_000G1_scaffold_306_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21216..22235
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08039.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
L2_022_000G1_scaffold_306_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22232..22954
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08040.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE
L2_022_000G1_scaffold_306_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22951..23562
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08041.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
L2_022_000G1_scaffold_306_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23587..24666
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08042.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_000G1_scaffold_306_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24700..25992
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08043.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_000G1_scaffold_306_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26219..28114
DNA (1896bp) protein (632aa)
Superfamily II DNA and RNA helicases (EC:3.6.1.-)
DEAD/DEAH box helicase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM3_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFQ08044.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_022_000G1_scaffold_306_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28111..28959
DNA (849bp) protein (283aa)
Methyltransferase domain. (EC:2.1.1.51)
Methyltransferase domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM4_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EFQ08045.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_022_000G1_scaffold_306_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29013..30530)
DNA (1518bp) protein (506aa)
Amino acid carrier protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG87_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EFQ07811.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amino acid carrier protein
L2_022_000G1_scaffold_306_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30932..31183)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07813.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_000G1_scaffold_306_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31263..32177
DNA (915bp) protein (305aa)
Uncharacterized protein (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07814.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Displaying items 1-30 of 63 in total

View Taxonomy