ggKbase home page

L2_022_000G1_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_366_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..677)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95993.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
conserved hypothetical protein, DUF218 family
L2_022_000G1_scaffold_366_2

Not on your lists

comp(712..2241)
DNA (1530bp) protein (510aa)
cls; cardiolipin synthetase (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17172.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_022_000G1_scaffold_366_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2413..3855)
DNA (1443bp) protein (481aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABK7_9FIRM
L2_022_000G1_scaffold_366_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3859..5307)
DNA (1449bp) protein (483aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
gatA2; Glutamyl-tRNA(Gln) amidotransferase subunit A 2 (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABK6_9FIRM
L2_022_000G1_scaffold_366_5

Not on your lists

comp(5320..5595)
DNA (276bp) protein (92aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XM06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17169.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
glutamyl-tRNA(Gln) amidotransferase, C subunit
L2_022_000G1_scaffold_366_6

Not on your lists


comp(5655..6965)
DNA (1311bp) protein (437aa)
aspS1; Aspartate-tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XYV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17168.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_022_000G1_scaffold_366_7

Not on your lists

7564..8070
DNA (507bp) protein (169aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X1N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17167.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
acetyltransferase
L2_022_000G1_scaffold_366_8

Not on your lists

comp(8160..8714)
DNA (555bp) protein (185aa)
Rubredoxin n=2 Tax=Clostridiales RepID=B0ABK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17166.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ruberythrin
L2_022_000G1_scaffold_366_9

Not on your lists

8895..9506
DNA (612bp) protein (204aa)
Putative manganese efflux pump MntP n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4C1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17165.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_022_000G1_scaffold_366_10

Not on your lists

comp(9624..10793)
DNA (1170bp) protein (390aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase n=2 Tax=Clostridiales RepID=B0ABK0_9FIRM
Alanine racemase 1 {ECO:0000313|EMBL:ETJ17164.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_022_000G1_scaffold_366_11

Not on your lists

comp(11008..11304)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XYW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17163.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_022_000G1_scaffold_366_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11384..13450)
DNA (2067bp) protein (689aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
resE9; sensor histidine kinase ResE (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABJ8_9FIRM
L2_022_000G1_scaffold_366_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13734..14285)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XB76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDQ95980.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
trpP; tryptophan transport protein
L2_022_000G1_scaffold_366_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14822..15919)
DNA (1098bp) protein (366aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4C4_9CLOT
hypothetical protein
L2_022_000G1_scaffold_366_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15931..16632)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95978.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_022_000G1_scaffold_366_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16707..17864)
DNA (1158bp) protein (386aa)
RNA polymerase sigma factor SigA n=2 Tax=Clostridiales RepID=B0ABJ4_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
RNA polymerase sigma factor
L2_022_000G1_scaffold_366_17

Not on your lists

comp(17894..19711)
DNA (1818bp) protein (606aa)
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X1P8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17157.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_022_000G1_scaffold_366_18
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20190..20378)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ABJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09649.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_000G1_scaffold_366_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20455..21165)
DNA (711bp) protein (237aa)
Polysaccharide deacetylase, PdaB family n=2 Tax=Clostridiales RepID=B0ABJ0_9FIRM
Polysaccharide deacetylase PdaB family {ECO:0000313|EMBL:CDA09650.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
exported polysaccharide deacetylase
L2_022_000G1_scaffold_366_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21251..22057)
DNA (807bp) protein (269aa)
MORN repeat protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABI9_9FIRM
MORN repeat protein {ECO:0000313|EMBL:EDQ95972.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_022_000G1_scaffold_366_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22337..23404)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XYW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09652.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_000G1_scaffold_366_22
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23777..24814)
DNA (1038bp) protein (346aa)
UPI0003D59DCE related cluster n=1 Tax=unknown RepID=UPI0003D59DCE
Uncharacterized protein {ECO:0000313|EMBL:ETI99288.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ABC transporter substrate-binding protein
L2_022_000G1_scaffold_366_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25040..25675
DNA (636bp) protein (212aa)
UPI0003D6176D related cluster n=1 Tax=unknown RepID=UPI0003D6176D
Uncharacterized protein {ECO:0000313|EMBL:ETI99287.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L2_022_000G1_scaffold_366_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25800..26048)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4D3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09655.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_022_000G1_scaffold_366_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26401..27363
DNA (963bp) protein (321aa)
Putative beta-lactamase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XM22_9CLOT
Putative beta-lactamase {ECO:0000313|EMBL:CDA09656.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
beta-lactamase
L2_022_000G1_scaffold_366_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27452..28357)
DNA (906bp) protein (302aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDQ95964.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDQ95964.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABI1_9FIRM
cell wall hydrolase/autolysin
L2_022_000G1_scaffold_366_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28614..28958)
DNA (345bp) protein (115aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X1Q7_9CLOT
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDA09658.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
FAD binding domain protein
L2_022_000G1_scaffold_366_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28983..29915)
DNA (933bp) protein (311aa)
UPI0003D5FC96 related cluster n=1 Tax=unknown RepID=UPI0003D5FC96
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDA09658.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
pyridine nucleotide-disulfide oxidoreductase
L2_022_000G1_scaffold_366_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30369..32165)
DNA (1797bp) protein (599aa)
Hydrogenase, Fe-only {ECO:0000313|EMBL:EDQ95962.1}; EC=1.12.-.- {ECO:0000313|EMBL:EDQ95962.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
iron-only hydrogenase catalytic subunit HymC-like protein (EC:1.6.99.5)
Hydrogenase, Fe-only n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABH9_9FIRM
L2_022_000G1_scaffold_366_30
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32217..34103)
DNA (1887bp) protein (629aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4D7_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDA09660.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hymB; iron-only hydrogenase, electron-transferring subunit
Displaying items 1-30 of 58 in total

View Taxonomy