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L2_022_000G1_scaffold_385

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_385_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60..356
DNA (297bp) protein (99aa)
Addiction module antitoxin, RelB/DinJ family protein n=4 Tax=Bifidobacterium bifidum RepID=E3EMG0_BIFBS
DNA-damage-inducible protein J
Uncharacterized protein {ECO:0000313|EMBL:KFI43263.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_022_000G1_scaffold_385_2
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

349..708
DNA (360bp) protein (120aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=E4VAK7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB21973.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_022_000G1_scaffold_385_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1650..2813
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAK8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50650.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_022_000G1_scaffold_385_4
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2823..3278
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4D0J8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFI50872.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
hypothetical protein
L2_022_000G1_scaffold_385_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3153..3803)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCA7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI43266.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_022_000G1_scaffold_385_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4444..6774)
DNA (2331bp) protein (777aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase n=3 Tax=Bifidobacterium bifidum RepID=I3WIV7_BIFBI
GTP pyrophosphokinase {ECO:0000313|EMBL:EKE50561.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_022_000G1_scaffold_385_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6924..7412)
DNA (489bp) protein (163aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Bifidobacterium bifidum RepID=E4VAL3_BIFBI
L2_022_000G1_scaffold_385_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7400..7693)
DNA (294bp) protein (98aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WIV9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53412.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_000G1_scaffold_385_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7843..8898
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMX9_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53413.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_000G1_scaffold_385_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9015..10247)
DNA (1233bp) protein (411aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=2 Tax=Bifidobacterium bifidum RepID=U2CHR8_BIFBI
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:ERI83588.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98447.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Nucleotide pyrophosphatase
L2_022_000G1_scaffold_385_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10396..13068
DNA (2673bp) protein (891aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
GyrA DNA gyrase subunit A n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6G963_9BIFI
L2_022_000G1_scaffold_385_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13299..17936)
DNA (4638bp) protein (1546aa)
DEAD/DEAH box helicase n=2 Tax=Bifidobacterium bifidum RepID=E4VAR1_BIFBI
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFR50661.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
ATP-dependent helicase II
L2_022_000G1_scaffold_385_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17994..18491)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMY4_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53418.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_000G1_scaffold_385_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18858..20297
DNA (1440bp) protein (480aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase {ECO:0000313|EMBL:AFL04829.1}; EC=4.3.1.1 {ECO:0000313|EMBL:AFL04829.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Aspartate ammonia-lyase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIW6_BIFBI
L2_022_000G1_scaffold_385_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20378..22690)
DNA (2313bp) protein (771aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
GyrB DNA gyrase subunit B n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6G971_9BIFI
GyrB DNA gyrase subunit B {ECO:0000313|EMBL:CDB21988.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_022_000G1_scaffold_385_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22823..24349)
DNA (1527bp) protein (509aa)
RNA polymerase sigma factor SigA n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CGB9_BIFBI
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
RNA polymerase principal sigma factor HrdB
L2_022_000G1_scaffold_385_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24500..25249)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXN8_BIFBP
Uncharacterized protein {ECO:0000313|EMBL:BAQ98455.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_022_000G1_scaffold_385_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25369..26466
DNA (1098bp) protein (366aa)
idsA; polyprenyl synthetase (EC:2.5.1.10)
Polyprenyl synthetase n=3 Tax=Bifidobacterium bifidum RepID=E3EMY9_BIFBS
Polyprenyl synthetase {ECO:0000313|EMBL:ADO53423.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_000G1_scaffold_385_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26531..28672
DNA (2142bp) protein (714aa)
pknA; serine/threonine protein kinase (EC:2.7.11.1)
Kinase domain protein n=3 Tax=Bifidobacterium bifidum RepID=E4VAR8_BIFBI
Kinase domain protein {ECO:0000313|EMBL:EFR50668.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_022_000G1_scaffold_385_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28770..29486)
DNA (717bp) protein (239aa)
plsC; 1-acyl-sn-glycerol-3-phosphate acyl transferase (EC:2.3.1.51)
Acyltransferase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAR9_BIFBI
Acyltransferase {ECO:0000313|EMBL:EFR50669.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_022_000G1_scaffold_385_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29535..30134
DNA (600bp) protein (200aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXP2_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83600.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_022_000G1_scaffold_385_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30173..31219)
DNA (1047bp) protein (349aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Anthranilate phosphoribosyltransferase n=2 Tax=Bifidobacterium RepID=K2IRL3_BIFBI
trpD; anthranilate phosphoribosyltransferase
L2_022_000G1_scaffold_385_23
unknown

Not on your lists

31353..32078
DNA (726bp) protein (242aa)

This feature has no annotations

L2_022_000G1_scaffold_385_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31912..34866)
DNA (2955bp) protein (985aa)
Protein translocase subunit SecA n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAS2_BIFBI
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
secA; protein translocase subunit secA
L2_022_000G1_scaffold_385_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35006..35671)
DNA (666bp) protein (222aa)
Ribosome-associated factor Y n=8 Tax=Bifidobacterium RepID=E3EMZ5_BIFBS
ribosome-associated factor Y
Ribosome-associated factor Y {ECO:0000313|EMBL:EKE51432.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_022_000G1_scaffold_385_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35832..36056
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2HV73_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83604.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_022_000G1_scaffold_385_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36129..36431
DNA (303bp) protein (101aa)
ArsR family transcriptional regulator n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I920_BIFBI
ArsR family transcriptional regulator {ECO:0000313|EMBL:EKE51434.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Transcriptional regulator
L2_022_000G1_scaffold_385_28
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37280..37705)
DNA (426bp) protein (142aa)
RecX-like protein n=4 Tax=Bifidobacterium RepID=E3EMZ7_BIFBS
recX; RecX-like protein
RecX-like protein {ECO:0000313|EMBL:CDB24342.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_022_000G1_scaffold_385_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(37897..39087)
DNA (1191bp) protein (397aa)
Protein RecA n=6 Tax=Bifidobacterium RepID=E3EMZ8_BIFBS
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_022_000G1_scaffold_385_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39357..39590)
DNA (234bp) protein (78aa)
Uncharacterized protein n=6 Tax=Bifidobacterium bifidum RepID=I3WIY0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83608.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Displaying items 1-30 of 51 in total

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