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L2_022_000G1_scaffold_396

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Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_396_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..239)
DNA (237bp) protein (79aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TLR4_CITRI
clpX; ATP-dependent protease ATP-binding subunit
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_022_000G1_scaffold_396_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(365..988)
DNA (624bp) protein (208aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=656420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M863.;"
ATP-dependent Clp protease proteolytic subunit n=1418 Tax=Enterobacteriaceae RepID=CLPP_ECO24
clpP; ATP-dependent Clp protease proteolytic subunit
L2_022_000G1_scaffold_396_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1234..2532)
DNA (1299bp) protein (433aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Trigger factor n=224 Tax=Escherichia RepID=TIG_ECOL5
tig; trigger factor
L2_022_000G1_scaffold_396_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2876..3190)
DNA (315bp) protein (105aa)
Protein BolA n=1354 Tax=Enterobacteriaceae RepID=BOLA_ECOL6
bolA; regulator of penicillin binding proteins and beta lactamase transcription (morphogene)
Transcriptional regulator BolA {ECO:0000313|EMBL:AEQ11250.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
L2_022_000G1_scaffold_396_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3498..4076
DNA (579bp) protein (193aa)
Uncharacterized lipoprotein n=20 Tax=Enterobacteriaceae RepID=E8Y8N9_ECOKO
putative lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:KDV39296.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L2_022_000G1_scaffold_396_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4120..5595
DNA (1476bp) protein (492aa)
Muropeptide transporter n=55 Tax=Escherichia coli RepID=B7UJQ6_ECO27
putative transport protein
Protein AmpG {ECO:0000313|EMBL:EHU27561.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L2_022_000G1_scaffold_396_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6055..7002
DNA (948bp) protein (316aa)
cytochrome o ubiquinol oxidase subunit II (EC:1.10.3.-)
Ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EMU65533.1}; EC=1.10.3.- {ECO:0000313|EMBL:EMU65533.1};; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
Cytochrome o ubiquinol oxidase subunit II n=193 Tax=Escherichia RepID=E2QGH6_ECOLX
L2_022_000G1_scaffold_396_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7024..9015
DNA (1992bp) protein (664aa)
Cytochrome O ubiquinol oxidase subunit I n=50 Tax=Escherichia RepID=D2ND75_ECOS5
cyoB; Cytochrome O ubiquinol oxidase subunit I
Cytochrome O ubiquinol oxidase subunit I {ECO:0000313|EMBL:BAI53931.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_022_000G1_scaffold_396_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9005..9619
DNA (615bp) protein (205aa)
Cytochrome o ubiquinol oxidase, subunit III {ECO:0000313|EMBL:EHX35913.1}; EC=1.10.3.- {ECO:0000313|EMBL:EHX35913.1};; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
Cytochrome bo(3) ubiquinol oxidase subunit 3 n=1049 Tax=Enterobacteriaceae RepID=CYOC_ECOL6
cytochrome o ubiquinol oxidase subunit III
L2_022_000G1_scaffold_396_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9619..9948
DNA (330bp) protein (110aa)
Cytochrome o ubiquinol oxidase protein cyoD n=225 Tax=Escherichia RepID=E2QGH3_ECOLX
cyoD; cytochrome o ubiquinol oxidase subunit IV
Cytochrome o ubiquinol oxidase CyoD {ECO:0000313|EMBL:EQX32828.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_022_000G1_scaffold_396_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9960..10850
DNA (891bp) protein (297aa)
cyoE; protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
Protoheme IX farnesyltransferase n=188 Tax=Escherichia RepID=CYOE_ECOK1
L2_022_000G1_scaffold_396_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10999..12363
DNA (1365bp) protein (455aa)
Membrane protein n=36 Tax=Escherichia RepID=V8L363_ECOLX
putative transport protein
Hypothetical transport protein YajR {ECO:0000313|EMBL:CDN80816.1}; YajR protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L2_022_000G1_scaffold_396_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12491..12982)
DNA (492bp) protein (164aa)
Uncharacterized protein n=6 Tax=Enterobacteriaceae RepID=F4NMI0_9ENTR
hypothetical protein
UPF0234 protein YajQ {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
L2_022_000G1_scaffold_396_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13150..14061
DNA (912bp) protein (304aa)
panE; 2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
2-dehydropantoate 2-reductase n=68 Tax=Escherichia coli RepID=B7MQE0_ECO81
L2_022_000G1_scaffold_396_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14024..14614
DNA (591bp) protein (197aa)
4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis n=862 Tax=Enterobacteriaceae RepID=J7Q6C9_ECOLX
yajL; oxidative-stress-resistance chaperone
Chaperone YajL {ECO:0000313|EMBL:EOU98315.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
L2_022_000G1_scaffold_396_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14668..16116)
DNA (1449bp) protein (483aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00022963}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA sulfurtransferase; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
tRNA sulfurtransferase n=311 Tax=Escherichia RepID=THII_ECO45
yajK; thiamine biosynthesis protein ThiI
L2_022_000G1_scaffold_396_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16322..16564
DNA (243bp) protein (81aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Exodeoxyribonuclease 7 small subunit n=1386 Tax=Enterobacteriaceae RepID=EX7S_ECO24
xseB; exonuclease VII small subunit
L2_022_000G1_scaffold_396_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16564..17463
DNA (900bp) protein (300aa)
Farnesyl diphosphate synthase n=2 Tax=Escherichia coli RepID=T7RU11_ECOLX
ispA; geranyltranstransferase
Geranyltranstransferase {ECO:0000313|EMBL:EHU18956.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L2_022_000G1_scaffold_396_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17488..19350
DNA (1863bp) protein (621aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=226 Tax=Escherichia RepID=DXS_ECO7I
L2_022_000G1_scaffold_396_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19405..20379
DNA (975bp) protein (325aa)
Oxidoreductase, aldo/keto reductase family n=22 Tax=Escherichia RepID=B1LJG9_ECOSM
aldo/keto reductase family oxidoreductase
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:ACB18627.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
L2_022_000G1_scaffold_396_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20433..20951)
DNA (519bp) protein (173aa)
pgpA; phosphatidylglycerophosphatase A (EC:3.1.3.27)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Phosphatidylglycerophosphatase A n=314 Tax=Escherichia RepID=E2QGG2_ECOLX
L2_022_000G1_scaffold_396_22
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20929..21906)
DNA (978bp) protein (326aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=4 Tax=Escherichia RepID=L4KST0_ECOLX
L2_022_000G1_scaffold_396_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21984..22403)
DNA (420bp) protein (140aa)
N utilization substance protein B homolog n=1421 Tax=Enterobacteriaceae RepID=NUSB_ECO24
nusB; transcription antitermination protein
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_022_000G1_scaffold_396_24
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22423..22893)
DNA (471bp) protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=766155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1485-80.;"
6,7-dimethyl-8-ribityllumazine synthase n=1503 Tax=Bacteria RepID=RISB_CITK8
ribH; 6,7-dimethyl-8-ribityllumazine synthase
L2_022_000G1_scaffold_396_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22982..24085)
DNA (1104bp) protein (368aa)
ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:3.5.4.26)
Riboflavin biosynthesis protein RibD n=265 Tax=Escherichia coli RepID=E2QGF8_ECOLX
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L2_022_000G1_scaffold_396_26
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24089..24538)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=957 Tax=Enterobacteriaceae RepID=NRDR_ECO24
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1401327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae WRSd3.;"
L2_022_000G1_scaffold_396_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24689..25228
DNA (540bp) protein (180aa)
Uncharacterized protein n=47 Tax=Escherichia RepID=D2ND56_ECOS5
hypothetical protein
Hypothetical lipoprotein yajI {ECO:0000313|EMBL:CDL43935.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L2_022_000G1_scaffold_396_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25527..26411
DNA (885bp) protein (295aa)
Nucleoside-specific channel-forming protein tsx n=340 Tax=Escherichia RepID=E2QGF5_ECOLX
tsx; nucleoside-specific channel-forming protein Tsx
Nucleoside-specific channel-forming protein tsx {ECO:0000313|EMBL:ELJ76144.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_022_000G1_scaffold_396_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26449..26796)
DNA (348bp) protein (116aa)
Uncharacterized protein YajD n=1304 Tax=Enterobacteriaceae RepID=YAJD_ECO57
hypothetical protein
HNH endonuclease family protein {ECO:0000313|EMBL:KDY62336.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L2_022_000G1_scaffold_396_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26926..27897)
DNA (972bp) protein (324aa)
Protein translocase subunit SecF n=1280 Tax=Enterobacteriaceae RepID=SECF_ECO57
secF; preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
Displaying items 1-30 of 101 in total

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