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L2_022_000G1_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_397_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23..1882
DNA (1860bp) protein (620aa)
Chaperone protein DnaK n=1 Tax=Clostridium colicanis 209318 RepID=N9Y239_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
dnaK; chaperone protein DnaK
L2_022_000G1_scaffold_397_2
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1981..3108
DNA (1128bp) protein (376aa)
Chaperone protein DnaJ n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU95_9CLOT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
dnaJ; chaperone protein DnaJ
L2_022_000G1_scaffold_397_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3270..4814
DNA (1545bp) protein (515aa)
Putative Nitrite/sulfite reductase ferredoxin domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EJA6_9CLOT
Putative Nitrite/sulfite reductase ferredoxin domain protein {ECO:0000313|EMBL:CDG01332.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ferredoxin-nitrite reductase
L2_022_000G1_scaffold_397_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4938..5879
DNA (942bp) protein (314aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FL09_9CLOT
prmA; ribosomal protein L11 methyltransferase
L2_022_000G1_scaffold_397_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5896..6657
DNA (762bp) protein (254aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPZ0_9CLOT
L2_022_000G1_scaffold_397_6
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6657..7964
DNA (1308bp) protein (436aa)
mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB (EC:2.-.-.-)
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB {ECO:0000313|EMBL:AGF54700.1}; EC=2.-.-.- {ECO:0000313|EMBL:AGF54700.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LPD5_9CLOT
L2_022_000G1_scaffold_397_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7994..8338
DNA (345bp) protein (115aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TU69_9CLOT
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:EKQ50332.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
L2_022_000G1_scaffold_397_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8460..8636
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=5 Tax=Clostridium RepID=A6LRP2_CLOB8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_022_000G1_scaffold_397_9
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8667..9119
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FL13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG01339.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
yqey-like family protein
L2_022_000G1_scaffold_397_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9406..9699
DNA (294bp) protein (98aa)
Sporulation protein YqfC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG02_9CLOT
Sporulation protein YqfC {ECO:0000313|EMBL:EEH98820.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
yqfC; sporulation protein YqfC
L2_022_000G1_scaffold_397_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9690..10817
DNA (1128bp) protein (376aa)
Sporulation protein YqfD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNL2_CLOSA
yqfD; sporulation protein YqfD
Sporulation protein YqfD {ECO:0000313|EMBL:AGX42103.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_022_000G1_scaffold_397_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10851..12911
DNA (2061bp) protein (687aa)
Putative hydrolase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZH1_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83981.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_022_000G1_scaffold_397_13
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12971..13471
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Endoribonuclease YbeY n=1 Tax=Clostridium colicanis 209318 RepID=N9XRA6_9CLOT
putative metalloprotease
L2_022_000G1_scaffold_397_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13511..14197
DNA (687bp) protein (229aa)
Putative Diacylglycerol kinase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FL21_9CLOT
Putative Diacylglycerol kinase {ECO:0000313|EMBL:CDG01344.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
diacylglycerol kinase
L2_022_000G1_scaffold_397_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14275..14673
DNA (399bp) protein (133aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:AIY84627.1}; EC=3.5.4.5 {ECO:0000313|EMBL:AIY84627.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Cytidine deaminase n=6 Tax=Clostridium perfringens RepID=H7CY42_CLOPF
L2_022_000G1_scaffold_397_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14682..15572
DNA (891bp) protein (297aa)
GTPase Era n=2 Tax=Clostridium botulinum B RepID=ERA_CLOBB
era; GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_022_000G1_scaffold_397_17
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15584..16339
DNA (756bp) protein (252aa)
DNA repair protein RecO n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EJC2_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
recO; DNA repair protein RecO
L2_022_000G1_scaffold_397_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16341..16958
DNA (618bp) protein (206aa)
Ubiquitin-associated-domain-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCG7_9CLOT
Ubiquitin-associated-domain-containing protein {ECO:0000313|EMBL:EHI98079.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_022_000G1_scaffold_397_19
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17150..17785
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y334_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ02192.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
ccpN; transcriptional repressor CcpN
L2_022_000G1_scaffold_397_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17862..20489
DNA (2628bp) protein (876aa)
ppdK; pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q4T0_9CLOT
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EKY22720.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_022_000G1_scaffold_397_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20545..21618)
DNA (1074bp) protein (358aa)
Spore coat protein, CotS family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TGX2_9CLOT
Spore coat protein, CotS family {ECO:0000313|EMBL:EKQ50315.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
spore coat protein CotS
L2_022_000G1_scaffold_397_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21806..22840
DNA (1035bp) protein (345aa)
Deoxynucleotide triphosphohydrolase family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2K6_CLOBA
deoxyguanosinetriphosphate triphosphohydrolase-like protein
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:KIL09115.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_022_000G1_scaffold_397_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22987..24783
DNA (1797bp) protein (599aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
DNA primase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y224_9CLOT
dnaG; DNA primase
L2_022_000G1_scaffold_397_24
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24791..25900
DNA (1110bp) protein (370aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FL36_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rpoD; RNA polymerase sigma factor rpoD
L2_022_000G1_scaffold_397_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25989..26684
DNA (696bp) protein (232aa)
Bcl-2 family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2K9_CLOBA
hypothetical protein
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJU70810.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_022_000G1_scaffold_397_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26685..27479
DNA (795bp) protein (265aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QE99_9CLOT
NIF3 family protein
L2_022_000G1_scaffold_397_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28565..28777
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum NCTC 2916 RepID=B1QBE9_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KIN79885.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L2_022_000G1_scaffold_397_28
unknown

Not on your lists

28956..29312
DNA (357bp) protein (119aa)

This feature has no annotations

L2_022_000G1_scaffold_397_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29413..30270)
DNA (858bp) protein (286aa)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZE2_CLOBO
methyltransferase small domain protein
Methyltransferase small domain protein {ECO:0000313|EMBL:AIY82481.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_022_000G1_scaffold_397_30
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30380..31336
DNA (957bp) protein (319aa)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MEH7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70093.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Displaying items 1-30 of 59 in total

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