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L2_022_000G1_scaffold_416

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_416_1
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(270..1088)
DNA (819bp) protein (273aa)
Cof family hydrolase n=1 Tax=Clostridium intestinale URNW RepID=U2PY46_9CLOT
Cof family hydrolase {ECO:0000313|EMBL:ERK31405.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
HAD superfamily hydrolase
L2_022_000G1_scaffold_416_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1433..2158
DNA (726bp) protein (242aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U4S8_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EKQ56506.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
GntR family transcriptional regulator
L2_022_000G1_scaffold_416_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2450..3538
DNA (1089bp) protein (363aa)
membrane protein n=1 Tax=Clostridium botulinum RepID=UPI0002FD2DB8
Membrane lipoprotein tmpC {ECO:0000313|EMBL:AIY79039.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
membrane lipoprotein tmpc
L2_022_000G1_scaffold_416_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3616..4704
DNA (1089bp) protein (363aa)
Membrane lipoprotein TmpC n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LR73_9CLOT
tmpC1; membrane lipoprotein TmpC
Membrane lipoprotein tmpC {ECO:0000313|EMBL:AIY79039.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_022_000G1_scaffold_416_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5010..6023
DNA (1014bp) protein (338aa)
Alanine racemase {ECO:0000313|EMBL:ABR36258.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ABR36258.1};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Alanine racemase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M0X8_CLOB8
alanine racemase
L2_022_000G1_scaffold_416_6
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6248..7315
DNA (1068bp) protein (356aa)
Membrane lipoprotein TmpC n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LR73_9CLOT
tmpC1; membrane lipoprotein TmpC
Membrane lipoprotein TmpC {ECO:0000313|EMBL:AGF55415.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_416_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7721..9247
DNA (1527bp) protein (509aa)
ABC transporter ATP-binding protein YufO n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW50_CLOSA
yufO; ABC transporter ATP-binding protein YufO
ABC transporter ATP-binding protein YufO {ECO:0000313|EMBL:AGX44830.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_022_000G1_scaffold_416_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9240..10388
DNA (1149bp) protein (383aa)
Sugar ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=M8JIA1_CLOBU
Sugar ABC transporter permease {ECO:0000313|EMBL:KHD15938.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
sugar ABC transporter, permease protein
L2_022_000G1_scaffold_416_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10390..11343
DNA (954bp) protein (318aa)
ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=B1QZN9_CLOBU
yufQ; ABC transporter permease protein YufQ
ABC transporter, permease protein {ECO:0000313|EMBL:ETI90902.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_022_000G1_scaffold_416_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11511..11915
DNA (405bp) protein (135aa)
cdd1; cytidine deaminase Cdd (EC:3.5.4.5)
Cytidine deaminase n=2 Tax=Clostridium butyricum RepID=B1QZN8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94880.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_022_000G1_scaffold_416_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11946..12659
DNA (714bp) protein (238aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
deoD; purine nucleoside phosphorylase DeoD-type (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=4 Tax=Clostridium butyricum RepID=B1QZN7_CLOBU
L2_022_000G1_scaffold_416_12
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(12757..13110)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N6K0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF07707.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
L2_022_000G1_scaffold_416_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13131..13361)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MX45_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56047.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_416_14
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13961..14656
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CK66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90914.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L2_022_000G1_scaffold_416_15
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14769..15647)
DNA (879bp) protein (293aa)
Peptidoglycan-binding protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QWI4_9CLOT
Peptidoglycan-binding protein {ECO:0000313|EMBL:EPR07644.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
putative peptidoglycan-binding domain-containing protein
L2_022_000G1_scaffold_416_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15767..15988)
DNA (222bp) protein (74aa)
bacteriocin UviB n=1 Tax=Clostridium botulinum RepID=UPI00030460C0
UviB-like protein {ECO:0000313|EMBL:EHJ00478.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
UviB-like protein
L2_022_000G1_scaffold_416_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16006..16527)
DNA (522bp) protein (174aa)
RNA polymerase subunit sigma-24 n=1 Tax=Clostridium botulinum RepID=UPI00036469DB
botR; transcriptional regulator BotR, P-21
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KIL09073.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_022_000G1_scaffold_416_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17819..18445
DNA (627bp) protein (209aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M2S3_9CLOT
Helix-turn-helix domain protein {ECO:0000313|EMBL:EHI99575.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Predicted transcriptional regulators
L2_022_000G1_scaffold_416_19
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18696..20687
DNA (1992bp) protein (664aa)
Endothelin-converting enzyme 1 (EC:3.4.24.71)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF44773.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
L2_022_000G1_scaffold_416_20
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20933..21574)
DNA (642bp) protein (214aa)
glycosyltransferase n=1 Tax=[Clostridium] glycolicum RepID=UPI00037D7F57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM69876.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_022_000G1_scaffold_416_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21824..22447
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MCN1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF55664.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_416_22
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22470..23171
DNA (702bp) protein (234aa)
fructose-2,6-bisphosphatase (EC:5.4.2.1)
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:AGF55230.1}; EC=5.4.2.- {ECO:0000313|EMBL:AGF55230.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Fructose-2,6-bisphosphatase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LQT5_9CLOT
L2_022_000G1_scaffold_416_23
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23195..23680
DNA (486bp) protein (162aa)
TIGR02172 protein, Fibrobacter succinogene family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BHK7_9CLOT
TIGR02172 protein, Fibrobacter succinogene family {ECO:0000313|EMBL:ERI71353.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
aminoglycoside phosphotransferase
L2_022_000G1_scaffold_416_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24102..24437
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002DCB1DC
Uncharacterized protein {ECO:0000313|EMBL:KIE44505.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_022_000G1_scaffold_416_25
unknown

Not on your lists

comp(24385..24597)
DNA (213bp) protein (71aa)

This feature has no annotations

L2_022_000G1_scaffold_416_26
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25236..25910)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6L7_9CLOT
putative Zn peptidase
Putative Zn peptidase {ECO:0000313|EMBL:AGF54522.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_416_27
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25891..26265)
DNA (375bp) protein (125aa)
XRE family transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FQT8_CLOPA
XRE family transcriptional regulator {ECO:0000313|EMBL:ETD66236.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
XRE family transcriptional regulator
L2_022_000G1_scaffold_416_28
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26512..26688
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:AJG98833.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_022_000G1_scaffold_416_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26722..27270
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYA7_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES48080.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L2_022_000G1_scaffold_416_30
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27355..27573)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M190_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99966.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
Displaying items 1-30 of 58 in total

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