ggKbase home page

L2_022_000G1_scaffold_444

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_444_1
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MUK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71467.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
type III restriction protein res subunit
L2_022_000G1_scaffold_444_2
unknown

Not on your lists

comp(267..1508)
DNA (1242bp) protein (414aa)

This feature has no annotations

L2_022_000G1_scaffold_444_3
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1508..2302)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K587_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38812.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L2_022_000G1_scaffold_444_4
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2305..3564)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Streptococcus mutans G123 RepID=M2HBZ9_STRMG
Putative type I restriction-modification system {ECO:0000313|EMBL:CCZ94184.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hsdS; type I restriction-modification system specificity subunit
L2_022_000G1_scaffold_444_5
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3557..5365)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MKB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71455.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
N-6 DNA methylase
L2_022_000G1_scaffold_444_6
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5717..7426)
DNA (1710bp) protein (570aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus laterosporus LMG 15441 RepID=F7TW00_BRELA
reverse transcriptase
Reverse transcriptase {ECO:0000313|EMBL:AIG26831.1}; TaxID=1042163 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus LMG 15441.;"
L2_022_000G1_scaffold_444_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8006..8464)
DNA (459bp) protein (153aa)
SsrA-binding protein n=3 Tax=Clostridiales RepID=B0A6P2_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
smpB; SsrA-binding protein
L2_022_000G1_scaffold_444_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8611..9534)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XDR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10504.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_000G1_scaffold_444_9
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9649..11829)
DNA (2181bp) protein (727aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
rnr; ribonuclease R (EC:3.1.-.-)
UPI0003D5C215 related cluster n=1 Tax=unknown RepID=UPI0003D5C215
L2_022_000G1_scaffold_444_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12380..12568
DNA (189bp) protein (63aa)
Ferredoxin n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XP08_9CLOT
Ferredoxin {ECO:0000313|EMBL:CDA10506.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ferredoxin
L2_022_000G1_scaffold_444_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12661..13350)
DNA (690bp) protein (230aa)
FCD domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y1J6_9CLOT
FCD domain protein {ECO:0000313|EMBL:CDA10507.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
transcriptional regulator
L2_022_000G1_scaffold_444_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13707..15374
DNA (1668bp) protein (556aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
UPI0003D66552 related cluster n=1 Tax=unknown RepID=UPI0003D66552
L2_022_000G1_scaffold_444_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15454..16392
DNA (939bp) protein (313aa)
Transporter, auxin efflux carrier (AEC) family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6N7_9FIRM
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EDQ97649.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
malate transporter
L2_022_000G1_scaffold_444_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16571..16810)
DNA (240bp) protein (80aa)
Preprotein translocase SecG subunit n=2 Tax=Clostridiales RepID=R5X6W1_9CLOT
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDA10510.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
subunit of preprotein translocase
L2_022_000G1_scaffold_444_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16931..18040)
DNA (1110bp) protein (370aa)
UPI0003D64E6A related cluster n=1 Tax=unknown RepID=UPI0003D64E6A
Uncharacterized protein {ECO:0000313|EMBL:ETI93314.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ABC-type multidrug transport system, permease component
L2_022_000G1_scaffold_444_16
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18033..19160)
DNA (1128bp) protein (376aa)
UPI0003D5F4E9 related cluster n=1 Tax=unknown RepID=UPI0003D5F4E9
Uncharacterized protein {ECO:0000313|EMBL:ETI93315.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ABC-2 type transporter
L2_022_000G1_scaffold_444_17
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19343..20635)
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Enolase n=2 Tax=Clostridiales RepID=B0A7E7_9FIRM
eno; enolase
L2_022_000G1_scaffold_444_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20888..22414)
DNA (1527bp) protein (509aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
gpmI; 2,3-bisphosphoglycerate-independentphosphoglycer ate mutase (Phosphoglyceromutase)(BPG-independent PGAM) (iPGM) (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7E6_9FIRM
L2_022_000G1_scaffold_444_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22431..23177)
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
tpi; Triosephosphate isomerase (TIM)(Triose-phosphate isomerase) (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X6W6_9CLOT
L2_022_000G1_scaffold_444_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23258..24460)
DNA (1203bp) protein (401aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7E4_9FIRM
L2_022_000G1_scaffold_444_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24745..25752)
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=2 Tax=Clostridiales RepID=B0A7E3_9FIRM
glyceraldehyde-3-phosphate dehydrogenase 2
L2_022_000G1_scaffold_444_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25837..26904)
DNA (1068bp) protein (356aa)
Putative sugar-binding domain protein n=2 Tax=Clostridiales RepID=B0A7E2_9FIRM
Putative sugar-binding domain protein {ECO:0000313|EMBL:CDA10518.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
cggR; central glycolytic genes regulator
L2_022_000G1_scaffold_444_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26982..28454)
DNA (1473bp) protein (491aa)
RNA polymerase sigma-54 factor n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XDS6_9CLOT
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CDA10519.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
glnF; RNA polymerase sigma-54 factor
L2_022_000G1_scaffold_444_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28631..30085)
DNA (1455bp) protein (485aa)
Transporter major facilitator family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X6X1_9CLOT
Transporter major facilitator family protein {ECO:0000313|EMBL:CDA10520.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_000G1_scaffold_444_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30189..31364)
DNA (1176bp) protein (392aa)
Amidohydrolase n=2 Tax=Clostridiales RepID=B0A7D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI93324.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
amidohydrolase
L2_022_000G1_scaffold_444_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31587..32906
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7D8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97636.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
conserved hypothetical protein
L2_022_000G1_scaffold_444_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32949..33890)
DNA (942bp) protein (314aa)
33 kDa chaperonin n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4F5_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hslO; 33 kDa chaperonin (Heat shock protein 33homolog) (HSP33)
L2_022_000G1_scaffold_444_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33913..34659)
DNA (747bp) protein (249aa)
Methyltransferase domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XDS8_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDA10524.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
methyltransferase
L2_022_000G1_scaffold_444_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34646..34948)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A7D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA10525.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
small acid-soluble spore protein
L2_022_000G1_scaffold_444_30
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35138..36751)
DNA (1614bp) protein (538aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XP26_9CLOT
Gamma-glutamyltransferase {ECO:0000313|EMBL:CDA10526.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Displaying items 1-30 of 49 in total

View Taxonomy