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L2_022_000G1_scaffold_482

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_482_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1191
DNA (1191bp) protein (397aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TTG7_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L2_022_000G1_scaffold_482_2
unknown

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1429..1719
DNA (291bp) protein (97aa)

This feature has no annotations

L2_022_000G1_scaffold_482_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1774..4425
DNA (2652bp) protein (884aa)
DNA mismatch repair protein MutS n=2 Tax=Lachnospiraceae RepID=F7JVT5_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA mismatch repair protein MutS
L2_022_000G1_scaffold_482_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4445..6439
DNA (1995bp) protein (665aa)
DNA mismatch repair protein MutL n=3 Tax=Clostridiales RepID=F7JVT6_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DNA mismatch repair protein MutL
L2_022_000G1_scaffold_482_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6440..7408
DNA (969bp) protein (323aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=2 Tax=Lachnospiraceae RepID=F7JVT7_9FIRM
L2_022_000G1_scaffold_482_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7405..8706
DNA (1302bp) protein (434aa)
Aluminum resistance protein n=3 Tax=Lachnospiraceae RepID=A7B2V9_RUMGN
Aluminum resistance protein {ECO:0000313|EMBL:EDN77732.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L2_022_000G1_scaffold_482_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8724..9950
DNA (1227bp) protein (409aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYM6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20268.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
conserved hypothetical protein TIGR00275
L2_022_000G1_scaffold_482_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9937..11529
DNA (1593bp) protein (531aa)
FAD dependent oxidoreductase n=4 Tax=Clostridiales RepID=A7B2W1_RUMGN
FAD dependent oxidoreductase {ECO:0000313|EMBL:EDN77734.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Uncharacterized FAD-dependent dehydrogenases
L2_022_000G1_scaffold_482_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11622..12317
DNA (696bp) protein (232aa)
DNA repair protein RadC n=3 Tax=Lachnospiraceae RepID=A7B2W2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48411.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA replication and repair protein RadC
L2_022_000G1_scaffold_482_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12283..13365
DNA (1083bp) protein (361aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZR6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20265.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Actin-like ATPase involved in cell morphogenesis
L2_022_000G1_scaffold_482_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13367..14236
DNA (870bp) protein (290aa)
Cell shape-determining protein MreC n=3 Tax=Lachnospiraceae RepID=A7B2W4_RUMGN
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
rod shape-determining protein MreC
L2_022_000G1_scaffold_482_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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14255..14788
DNA (534bp) protein (178aa)
Rod shape-determining protein MreD n=4 Tax=Clostridiales RepID=A7B2W5_RUMGN
Rod shape-determining protein MreD {ECO:0000313|EMBL:EGN48414.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
rod shape-determining protein MreD
L2_022_000G1_scaffold_482_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14781..17636
DNA (2856bp) protein (952aa)
Penicillin-binding protein, transpeptidase domain protein n=3 Tax=Lachnospiraceae RepID=A7B2W6_RUMGN
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EDN77739.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
pbpA1; penicillin-binding protein PbpA1
L2_022_000G1_scaffold_482_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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17654..18292
DNA (639bp) protein (213aa)
Septum site-determining protein MinC n=3 Tax=Lachnospiraceae RepID=V8C0J7_RUMGN
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Septum formation inhibitor
L2_022_000G1_scaffold_482_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18329..19120
DNA (792bp) protein (264aa)
Site-determining protein n=3 Tax=Lachnospiraceae RepID=A7B2W8_RUMGN
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
septum site-determining protein MinD
L2_022_000G1_scaffold_482_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19132..19341
DNA (210bp) protein (70aa)
Cell division topological specificity factor MinE n=3 Tax=Lachnospiraceae RepID=V8BYQ9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48418.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Septum formation topological specificity factor MinE.
L2_022_000G1_scaffold_482_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19338..20468
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BYL6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20258.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Bacterial cell division membrane protein
L2_022_000G1_scaffold_482_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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20484..20879
DNA (396bp) protein (132aa)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=4 Tax=Clostridiales RepID=F7JVV1_9FIRM
L2_022_000G1_scaffold_482_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20863..21900
DNA (1038bp) protein (346aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2X2_RUMGN
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDN77745.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
D-alanyl-D-alanine carboxypeptidase
L2_022_000G1_scaffold_482_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21964..22173)
DNA (210bp) protein (70aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B2X3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77746.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_022_000G1_scaffold_482_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22302..23681
DNA (1380bp) protein (460aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B2X4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48424.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_482_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23703..24395
DNA (693bp) protein (231aa)
Pyridoxal phosphate enzyme, YggS family n=3 Tax=Lachnospiraceae RepID=A7B2X5_RUMGN
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EGN48425.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
pyridoxal phosphate enzyme, YggS family
L2_022_000G1_scaffold_482_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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24475..25014
DNA (540bp) protein (180aa)
Cell division protein SepF n=4 Tax=Clostridiales RepID=A7B2X6_RUMGN
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_482_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25026..25814
DNA (789bp) protein (263aa)
S4 domain protein n=3 Tax=Lachnospiraceae RepID=A7B2X7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20251.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Uncharacterized conserved protein, contains S4-like domain
L2_022_000G1_scaffold_482_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25840..26364
DNA (525bp) protein (175aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=2 Tax=Clostridiales RepID=R5UCF6_9FIRM
L2_022_000G1_scaffold_482_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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26361..27290
DNA (930bp) protein (310aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase, RluA family n=3 Tax=Lachnospiraceae RepID=A7B2Y0_RUMGN
L2_022_000G1_scaffold_482_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27412..27990
DNA (579bp) protein (193aa)
Phosphatidylglycerophosphate synthase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=3 Tax=Lachnospiraceae RepID=V8BYK4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48430.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_022_000G1_scaffold_482_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27977..28606
DNA (630bp) protein (210aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B2Y2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48431.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted double-stranded RNA/RNA-DNA hybrid binding protein
L2_022_000G1_scaffold_482_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28638..29528
DNA (891bp) protein (297aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B2Y3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48432.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_482_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29665..30312
DNA (648bp) protein (216aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B2Y4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20245.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Displaying items 1-30 of 59 in total

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