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L2_022_000G1_scaffold_540

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_540_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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353..1795
DNA (1443bp) protein (481aa)
Surface protein PspC n=2 Tax=Clostridium butyricum RepID=B1R0E3_CLOBU
CspC {ECO:0000313|EMBL:EEP53261.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative cell wall binding repeat-containing protein
L2_022_000G1_scaffold_540_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1833..2597)
DNA (765bp) protein (255aa)
Cof-like hydrolase n=1 Tax=Coprobacillus sp. D7 RepID=C3RKZ5_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EHM90459.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
HAD-superfamily hydrolase
L2_022_000G1_scaffold_540_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2902..3330
DNA (429bp) protein (143aa)
UPI0003D5F225 related cluster n=1 Tax=unknown RepID=UPI0003D5F225
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ETI90499.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
GntR-family transcriptional regulator
L2_022_000G1_scaffold_540_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3336..4208
DNA (873bp) protein (291aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUI5_CLOBO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES51354.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
ABC transporter ATP-binding protein
L2_022_000G1_scaffold_540_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4192..4824
DNA (633bp) protein (211aa)
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUI4_CLOBO
Putative membrane protein {ECO:0000313|EMBL:EES50370.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L2_022_000G1_scaffold_540_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5031..5585)
DNA (555bp) protein (185aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=N9Z984_CLOBU
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:KJZ86871.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative membrane-bound metal-dependent hydrolase
L2_022_000G1_scaffold_540_7
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5690..6127)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LWM3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57600.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_540_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6156..6911)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MI43_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57599.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_540_9
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7214..8620
DNA (1407bp) protein (469aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJL8_9CLOT
amino acid/polyamine/organocation transporter, APC superfamily
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:AGF58119.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_540_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8718..9281)
DNA (564bp) protein (188aa)
UPI0003D5E836 related cluster n=1 Tax=unknown RepID=UPI0003D5E836
Uncharacterized protein {ECO:0000313|EMBL:KHD14768.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_022_000G1_scaffold_540_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9460..9744
DNA (285bp) protein (95aa)
Bacterial regulatory , arsR family protein n=170 Tax=Clostridium difficile RepID=T3GP72_CLODC
ArsR family transcriptional regulator
Bacterial regulatory , arsR family protein {ECO:0000313|EMBL:EQI83611.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_022_000G1_scaffold_540_12
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

9728..10354
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R2M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35390.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
putative membrane protein, DUF1648 family
L2_022_000G1_scaffold_540_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10645..11469
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289E614
Uncharacterized protein {ECO:0000313|EMBL:KHD17221.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_022_000G1_scaffold_540_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11692..13932
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9G6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36430.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_022_000G1_scaffold_540_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14044..14463)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MST0_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43578.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_022_000G1_scaffold_540_16
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14537..15181)
DNA (645bp) protein (215aa)
Pentapeptide repeat family protein n=3 Tax=Clostridium butyricum RepID=B1QSZ4_CLOBU
Pentapeptide repeat protein {ECO:0000313|EMBL:KJZ89274.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
putative low-complexity protein
L2_022_000G1_scaffold_540_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15403..15843)
DNA (441bp) protein (147aa)
Putative membrane protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZW5_CLOBA
EamA-like transporter family protein {ECO:0000313|EMBL:AIY80457.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L2_022_000G1_scaffold_540_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15859..16281)
DNA (423bp) protein (141aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=M8JJK8_CLOBU
hypothetical protein
Putative membrane-spanning protein {ECO:0000313|EMBL:KJZ83558.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_022_000G1_scaffold_540_19
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16463..16711
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ56779.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_022_000G1_scaffold_540_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16722..17408
DNA (687bp) protein (229aa)
Catabolite gene activator n=2 Tax=Clostridium butyricum RepID=B1QSZ8_CLOBU
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EEP53985.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
cyclic nucleotide-binding protein
L2_022_000G1_scaffold_540_21
unknown

Not on your lists

17835..18044
DNA (210bp) protein (70aa)

This feature has no annotations

L2_022_000G1_scaffold_540_22
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18118..18798
DNA (681bp) protein (227aa)
Cyclic nucleotide-binding protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GMC4_9CLOT
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:CDB15317.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
cyclic nucleotide-binding protein
L2_022_000G1_scaffold_540_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18920..20563
DNA (1644bp) protein (548aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hcp1; hydroxylamine reductase Hcp (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8C4_9CLOT
L2_022_000G1_scaffold_540_24
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20687..21478)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MQN6_9CLOT
hypothetical protein DUF1189
Uncharacterized protein {ECO:0000313|EMBL:AGF57066.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_540_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21785..22333
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25273.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
SCP-2 sterol transfer family.
L2_022_000G1_scaffold_540_26
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22492..23169
DNA (678bp) protein (226aa)
Response regulator (CheY-like receiver and winged helix DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U583_9CLOT
Response regulator (CheY-like receiver and winged helix DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ56736.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
dltR; transcriptional regulatory protein DltR
L2_022_000G1_scaffold_540_27
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23166..24404
DNA (1239bp) protein (413aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
dltS; sensor protein DltS (EC:2.7.13.3)
Histidine kinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6C9_9CLOT
L2_022_000G1_scaffold_540_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24974..27118)
DNA (2145bp) protein (715aa)
Ferrous iron transport protein B n=2 Tax=Clostridium botulinum B RepID=B2TI81_CLOBB
Ferrous iron transport protein B {ECO:0000313|EMBL:AIY82115.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
ferrous iron transport protein B
L2_022_000G1_scaffold_540_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27369..27623)
DNA (255bp) protein (85aa)
Ferrous iron transport protein A n=4 Tax=Clostridium botulinum RepID=B2TI82_CLOBB
hypothetical protein
Iron transporter FeoA {ECO:0000313|EMBL:KIL07215.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_022_000G1_scaffold_540_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27751..28224
DNA (474bp) protein (158aa)
Putative iron-dependent repressor n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUJ0_CLOBO
Putative iron-dependent repressor {ECO:0000313|EMBL:EES47872.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
putative iron-dependent repressor
Displaying items 1-30 of 49 in total

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