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L2_022_000G1_scaffold_544

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_544_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..194)
DNA (192bp) protein (64aa)
Diaminopropionate ammonia-lyase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSP3_9FIRM
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:EGN43843.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
diaminopropionate ammonia-lyase
L2_022_000G1_scaffold_544_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(218..868)
DNA (651bp) protein (217aa)
YheO-like protein n=3 Tax=Lachnospiraceae RepID=A7B3N1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43842.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
YheO domain-containing protein
L2_022_000G1_scaffold_544_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1112..2443
DNA (1332bp) protein (444aa)
Putative chlorohydrolase/aminohydrolase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3N2_RUMGN
Putative chlorohydrolase/aminohydrolase {ECO:0000313|EMBL:EDN77558.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
putative selenium metabolism protein SsnA
L2_022_000G1_scaffold_544_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2457..5450
DNA (2994bp) protein (998aa)
putative selenate reductase, YgfK subunit (EC:1.97.1.9)
Selenate reductase n=3 Tax=Lachnospiraceae RepID=F7K1E6_9FIRM
Putative selenate reductase, YgfK subunit {ECO:0000313|EMBL:EDN77559.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_022_000G1_scaffold_544_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5543..6304
DNA (762bp) protein (254aa)
Selenium-dependent hydroxylase accessory protein YqeC n=3 Tax=Lachnospiraceae RepID=F7K1E5_9FIRM
Selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EGN43839.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
probable selenium-dependent hydroxylase accessory protein YqeC
L2_022_000G1_scaffold_544_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6301..7659
DNA (1359bp) protein (453aa)
Selenium-dependent molybdenum hydroxylase system protein, YqeB family n=3 Tax=Lachnospiraceae RepID=A7B3N5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43838.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
selenium-dependent molybdenum hydroxylase system protein, YqeB family
L2_022_000G1_scaffold_544_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7690..10260
DNA (2571bp) protein (857aa)
Selenium-dependent molybdenum hydroxylase 1 n=2 Tax=Lachnospiraceae RepID=F7K1E3_9FIRM
Selenium-dependent molybdenum hydroxylase 1 {ECO:0000313|EMBL:ETD20987.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_022_000G1_scaffold_544_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10384..11202
DNA (819bp) protein (273aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=2 Tax=Lachnospiraceae RepID=V8C2N9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43836.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein
L2_022_000G1_scaffold_544_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11220..11894
DNA (675bp) protein (225aa)
Molybdate ABC transporter, permease protein n=4 Tax=Clostridiales RepID=A7B3N8_RUMGN
Molybdate ABC transporter {ECO:0000313|EMBL:EGN43835.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
molybdate ABC transporter inner membrane subunit
L2_022_000G1_scaffold_544_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11900..12943
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C0V1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20984.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
modC; molybdate ABC transporter ATP-binding protein ModC
L2_022_000G1_scaffold_544_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12957..13304
DNA (348bp) protein (116aa)
Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=A7B3P0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43833.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_544_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13381..14133
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C1N4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43832.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_544_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14397..14702)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B3P3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43831.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_544_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14932..15963)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C1V0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43830.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_022_000G1_scaffold_544_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16075..17217)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B866_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76159.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_022_000G1_scaffold_544_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17372..17563)
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TYT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43828.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_544_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17665..18390
DNA (726bp) protein (242aa)
PHP domain protein n=3 Tax=Lachnospiraceae RepID=A7B864_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43827.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
phosphotransferase domain-containing protein
L2_022_000G1_scaffold_544_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18513..18800
DNA (288bp) protein (96aa)
TrpR family protein YerC/YecD n=4 Tax=Clostridiales RepID=A7B863_RUMGN
TrpR family protein YerC/YecD {ECO:0000313|EMBL:EDN76156.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
TrpR-related protein YerC/YecD
L2_022_000G1_scaffold_544_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18847..19464)
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B862_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43825.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Domain of unknown function (DUF1836).
L2_022_000G1_scaffold_544_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19581..19928
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68503.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_022_000G1_scaffold_544_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20058..22292
DNA (2235bp) protein (745aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYU3_9FIRM
L2_022_000G1_scaffold_544_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22396..22635
DNA (240bp) protein (80aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B859_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68505.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_022_000G1_scaffold_544_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22747..24117
DNA (1371bp) protein (457aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UBK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68506.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_022_000G1_scaffold_544_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24365..24583
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2J0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13830.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000G1_scaffold_544_25
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24610..25437
DNA (828bp) protein (276aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IUN4_9FIRM
L2_022_000G1_scaffold_544_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25446..26483)
DNA (1038bp) protein (346aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K4_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL13844.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000G1_scaffold_544_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26698..27789
DNA (1092bp) protein (364aa)
Esterase/lipase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K5_9FIRM
Esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:CBL13845.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000G1_scaffold_544_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27825..30089
DNA (2265bp) protein (755aa)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBL13846.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBL13846.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K6_9FIRM
L2_022_000G1_scaffold_544_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30099..31451
DNA (1353bp) protein (451aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K7_9FIRM
sugar (Glycoside-Pentoside-Hexuronide) transporter
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CBL13847.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000G1_scaffold_544_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31476..34271
DNA (2796bp) protein (932aa)
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K8_9FIRM
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:CBL13848.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
Displaying items 1-30 of 59 in total

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