ggKbase home page

L2_022_000G1_scaffold_551

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_551_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(266..1297)
DNA (1032bp) protein (344aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEM0_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEQ58266.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulator
L2_022_000G1_scaffold_551_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1578..2036
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ58267.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_022_000G1_scaffold_551_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2078..3010)
DNA (933bp) protein (311aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEM2_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EEQ58268.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
putative metal-dependent membrane protease
L2_022_000G1_scaffold_551_4
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3111..5021)
DNA (1911bp) protein (637aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98189.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
L2_022_000G1_scaffold_551_5
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5178..6137)
DNA (960bp) protein (320aa)
Glycerate dehydrogenase {ECO:0000313|EMBL:KJJ74504.1}; EC=1.1.1.29 {ECO:0000313|EMBL:KJJ74504.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Glycerate dehydrogenase (EC:1.1.1.29)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK90_9CLOT
L2_022_000G1_scaffold_551_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6167..7069)
DNA (903bp) protein (301aa)
Xylose isomerase n=6 Tax=Clostridium clostridioforme RepID=N9W0T3_9CLOT
Xylose isomerase {ECO:0000313|EMBL:ENZ66142.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
xylose isomerase
L2_022_000G1_scaffold_551_7
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7139..8050)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98192.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
sugar phosphate isomerase
L2_022_000G1_scaffold_551_8
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8106..9041)
DNA (936bp) protein (312aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98193.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L2_022_000G1_scaffold_551_9
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9041..9976)
DNA (936bp) protein (312aa)
transketolase (EC:2.2.1.1)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98194.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L2_022_000G1_scaffold_551_10
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9973..10638)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98195.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Asp/Glu racemase
L2_022_000G1_scaffold_551_11
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10635..11489)
DNA (855bp) protein (285aa)
D-tagatose 3-epimerase {ECO:0000313|EMBL:KJJ74498.1}; EC=5.3.1.- {ECO:0000313|EMBL:KJJ74498.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK96_9CLOT
Xylose isomerase domain-containing protein TIM barrel
L2_022_000G1_scaffold_551_12
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11564..12064)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JJK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63043.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L2_022_000G1_scaffold_551_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12078..12761)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YXM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16768.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
cyclase family protein
L2_022_000G1_scaffold_551_14
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12779..13807)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JP58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63045.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
putative transporter
L2_022_000G1_scaffold_551_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13830..15107)
DNA (1278bp) protein (426aa)
TRAP transporter, DctM subunit n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XN66_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ENZ16766.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
putative transporter
L2_022_000G1_scaffold_551_16
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15205..16386)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000367D234
Uncharacterized protein {ECO:0000313|EMBL:CDB63129.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
amidohydrolase
L2_022_000G1_scaffold_551_17
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16399..17889)
DNA (1491bp) protein (497aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003665794
Tripartite tricarboxylate transporter TctA family protein {ECO:0000313|EMBL:ERF59891.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
hypothetical protein
L2_022_000G1_scaffold_551_18
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17908..18369)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036AE919
conserved membrane protein of unknown function
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67009.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
L2_022_000G1_scaffold_551_19
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18438..19493)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000368999B
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:ERF59874.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
hypothetical protein
L2_022_000G1_scaffold_551_20
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19589..20602)
DNA (1014bp) protein (338aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKA0_9CLOT
pyridoxal phosphate biosynthesis protein
L2_022_000G1_scaffold_551_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21005..21646)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ74490.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Ribose 5-phosphate isomerase RpiB
L2_022_000G1_scaffold_551_22
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21657..22577)
DNA (921bp) protein (307aa)
Transketolase, pyridine binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB75_9CLOT
Transketolase {ECO:0000313|EMBL:KEZ89995.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
putative transketolase
L2_022_000G1_scaffold_551_23
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22577..23398)
DNA (822bp) protein (274aa)
Putative transketolase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S1A0_9FIRM
Transketolase, beta subunit {ECO:0000313|EMBL:EXG85237.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
putative transketolase
L2_022_000G1_scaffold_551_24
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23434..24120)
DNA (687bp) protein (229aa)
FCD domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB77_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:ETP71982.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
GntR domain-containing protein
L2_022_000G1_scaffold_551_25
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24168..24824)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59307.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
putative methyltransferase
L2_022_000G1_scaffold_551_26
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24848..25318)
DNA (471bp) protein (157aa)
Bifunctional hexulose-6-phosphate synthase/ribonuclease regulator domain protein n=2 Tax=Clostridium RepID=A7VXM8_9CLOT
Bifunctional hexulose-6-phosphate synthase/ribonuclease regulator domain protein {ECO:0000313|EMBL:EDO59306.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L2_022_000G1_scaffold_551_27
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25394..25525)
DNA (132bp) protein (44aa)
Bifunctional hexulose-6-phosphate synthase/ribonuclease regulator domain protein n=2 Tax=Clostridium RepID=A7VXM8_9CLOT
Bifunctional hexulose-6-phosphate synthase/ribonuclease regulator domain protein {ECO:0000313|EMBL:CDC05752.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_022_000G1_scaffold_551_28
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25536..26408)
DNA (873bp) protein (291aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=A7VXM7_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EDO59305.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
ABC transporter permease
L2_022_000G1_scaffold_551_29
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26516..27823)
DNA (1308bp) protein (436aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridium RepID=A7VXM6_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDO59304.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
sugar ABC transporter periplasmic protein
L2_022_000G1_scaffold_551_30
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27910..28572)
DNA (663bp) protein (221aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=A7VXM5_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDC05755.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ugpE; sugar ABC transporter ATP-binding protein
Displaying items 1-30 of 48 in total

View Taxonomy