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L2_022_000G1_scaffold_559

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_559_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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119..589
DNA (471bp) protein (157aa)
Sigma-70 region 2 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRS0_9CLOT
Sigma-70 region 2 {ECO:0000313|EMBL:CDA11481.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
sigma factor
L2_022_000G1_scaffold_559_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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614..1147
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11480.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_022_000G1_scaffold_559_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1160..1882
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96556.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L2_022_000G1_scaffold_559_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1925..2842
DNA (918bp) protein (306aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X752_9CLOT
L2_022_000G1_scaffold_559_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2924..3442
DNA (519bp) protein (173aa)
superoxide dismutase (Cu-Zn) (EC:1.15.1.1)
Copper/zinc superoxide dismutase n=2 Tax=Clostridiales RepID=B0A9Z5_9FIRM
Superoxide dismutase [Cu-Zn] {ECO:0000313|EMBL:CDA11477.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_022_000G1_scaffold_559_6
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3613..4587
DNA (975bp) protein (325aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRR3_9CLOT
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CDA11476.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ABC transporter permease
L2_022_000G1_scaffold_559_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4602..6374)
DNA (1773bp) protein (591aa)
Fibronectin-binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9H2_9CLOT
Fibronectin-binding protein {ECO:0000313|EMBL:CDA11475.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
fbpA; fibronectin-binding protein
L2_022_000G1_scaffold_559_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6583..6804
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A9Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11474.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_022_000G1_scaffold_559_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7227..8060
DNA (834bp) protein (278aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Diaminopimelate epimerase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X746_9CLOT
diaminopimelate epimerase
L2_022_000G1_scaffold_559_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8062..8943
DNA (882bp) protein (294aa)
TIGR00255 family protein n=2 Tax=Clostridiales RepID=B0A9Z0_9FIRM
TIGR00255 family protein {ECO:0000313|EMBL:EDQ96548.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_022_000G1_scaffold_559_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8979..9602
DNA (624bp) protein (208aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D642EB related cluster n=1 Tax=unknown RepID=UPI0003D642EB
gmk; guanylate kinase
L2_022_000G1_scaffold_559_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9604..9879
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=2 Tax=Clostridiales RepID=B0A9Y8_9FIRM
L2_022_000G1_scaffold_559_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9928..11139
DNA (1212bp) protein (404aa)
coaBC; coenzyme A biosynthesis bifunctional phosphopantothenoylcysteine synthetase/decarboxylase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=2 Tax=Clostridiales RepID=B0A9Y7_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CDA11469.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_022_000G1_scaffold_559_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11188..13806
DNA (2619bp) protein (873aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Primosomal protein N n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X739_9CLOT
priA; primosomal protein N'
L2_022_000G1_scaffold_559_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13833..14306
DNA (474bp) protein (158aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Peptide deformylase n=2 Tax=Clostridiales RepID=B0A9Y5_9FIRM
def2; peptide deformylase 2
L2_022_000G1_scaffold_559_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14334..15248
DNA (915bp) protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRQ0_9CLOT
fmt; methionyl-tRNA formyltransferase
L2_022_000G1_scaffold_559_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15267..15962
DNA (696bp) protein (232aa)
Putative neutral zinc metallopeptidase n=2 Tax=Clostridiales RepID=R5X9G6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI95974.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
membrane-associated neutral zinc metallopeptidase
L2_022_000G1_scaffold_559_18
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16065..17390
DNA (1326bp) protein (442aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGB7_9CLOT
rsmB; ribosomal RNA small subunit methyltransferase
L2_022_000G1_scaffold_559_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17400..18431
DNA (1032bp) protein (344aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Probable dual-specificity RNA methyltransferase RlmN n=2 Tax=Clostridiales RepID=B0A9Y1_9FIRM
radical SAM protein
L2_022_000G1_scaffold_559_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18449..19201
DNA (753bp) protein (251aa)
Protein phosphatase 2C n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y469_9CLOT
Protein phosphatase 2C {ECO:0000313|EMBL:CDA11462.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
serine/threonine phosphatase
L2_022_000G1_scaffold_559_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19214..21058
DNA (1845bp) protein (615aa)
Kinase domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRP4_9CLOT
Kinase domain protein {ECO:0000313|EMBL:CDA11461.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
serine/threonine-protein kinase and phosphatase
L2_022_000G1_scaffold_559_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21101..21982
DNA (882bp) protein (294aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Clostridiales RepID=B0A9X8_9FIRM
ATP/GTP-binding protein
L2_022_000G1_scaffold_559_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21985..22641
DNA (657bp) protein (219aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D5996D related cluster n=1 Tax=unknown RepID=UPI0003D5996D
ribulose-phosphate 3-epimerase
L2_022_000G1_scaffold_559_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22653..23300
DNA (648bp) protein (216aa)
UPI0003D5D174 related cluster n=1 Tax=unknown RepID=UPI0003D5D174
Uncharacterized protein {ECO:0000313|EMBL:ETI95967.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
thiamine pyrophosphokinase
L2_022_000G1_scaffold_559_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23350..23748)
DNA (399bp) protein (133aa)
Mutator mutT protein n=2 Tax=Clostridiales RepID=B0A9X5_9FIRM
Mutator mutT protein {ECO:0000313|EMBL:CDA11457.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
mutT_3; 7,8-dihydro-8-oxoguanine-triphosphatase
L2_022_000G1_scaffold_559_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23862..24719
DNA (858bp) protein (286aa)
Phospholipase patatin family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRN9_9CLOT
Phospholipase patatin family {ECO:0000313|EMBL:CDA11456.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
patatin
L2_022_000G1_scaffold_559_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24787..27390)
DNA (2604bp) protein (868aa)
Pyruvate phosphate dikinase PEP/pyruvate binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9G0_9CLOT
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein {ECO:0000313|EMBL:EDQ96531.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
phosphoenolpyruvate synthase/pyruvate phosphate dikinase
L2_022_000G1_scaffold_559_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28138..29442
DNA (1305bp) protein (435aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=3 Tax=Clostridiales RepID=B0A9X1_9FIRM
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EDQ96529.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Na+/H+-dicarboxylate symporters
L2_022_000G1_scaffold_559_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29723..29911)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=2 Tax=Clostridiales RepID=B0A9X0_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rpmB; 50S ribosomal protein L28
L2_022_000G1_scaffold_559_30
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30564..30914
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0AAY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11452.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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