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L2_022_000G1_scaffold_568

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_568_1
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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166..330
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RKW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90423.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcriptional regulator, MerR family
L2_022_000G1_scaffold_568_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

588..1211
DNA (624bp) protein (208aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RKW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90423.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_000G1_scaffold_568_3
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1251..1808)
DNA (558bp) protein (186aa)
Maf-like protein maf n=3 Tax=Erysipelotrichaceae RepID=B0N6W6_9FIRM
Maf-like protein HMPREF0978_01470 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Maf-like protein
L2_022_000G1_scaffold_568_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1808..3952)
DNA (2145bp) protein (715aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Polyribonucleotide nucleotidyltransferase n=2 Tax=Coprobacillus RepID=C3RKW0_9FIRM
pnp; polyribonucleotide nucleotidyltransferase
L2_022_000G1_scaffold_568_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4076..5332
DNA (1257bp) protein (419aa)
Cold-shock DNA-binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N6W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90420.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L2_022_000G1_scaffold_568_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5365..5766)
DNA (402bp) protein (134aa)
Iron dependent repressor DNA binding domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N6W3_9FIRM
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EDS17551.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Mn-dependent transcriptional regulator
L2_022_000G1_scaffold_568_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5846..6640
DNA (795bp) protein (265aa)
Metal cation transporter, ZIP family n=4 Tax=Erysipelotrichaceae RepID=B0N6W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35099.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
zinc/iron permease
L2_022_000G1_scaffold_568_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7060..8028
DNA (969bp) protein (323aa)
ABC transporter substrate binding protein n=4 Tax=Erysipelotrichaceae RepID=B0N6W1_9FIRM
ABC transporter substrate binding protein {ECO:0000313|EMBL:CCZ32210.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ABC transporter substrate-binding protein
L2_022_000G1_scaffold_568_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8028..8948
DNA (921bp) protein (307aa)
Branched-chain amino acid ABC transporter, permease protein n=4 Tax=Erysipelotrichaceae RepID=B0N6W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32209.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ABC-type uncharacterized transport system, permease component
L2_022_000G1_scaffold_568_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8941..9735
DNA (795bp) protein (265aa)
ABC transporter, ATP-binding protein n=2 Tax=Erysipelotrichaceae RepID=B0N6V9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS17547.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
ABC-type uncharacterized transport system, ATPase component
L2_022_000G1_scaffold_568_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9750..10382)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N6V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17546.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L2_022_000G1_scaffold_568_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10432..10788
DNA (357bp) protein (119aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RKV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32206.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_000G1_scaffold_568_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11063..11548)
DNA (486bp) protein (162aa)
Transcription elongation factor GreA n=5 Tax=Erysipelotrichaceae RepID=B0N6V6_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
greA; transcription elongation factor GreA
L2_022_000G1_scaffold_568_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11613..12233)
DNA (621bp) protein (207aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Uridine kinase n=5 Tax=Erysipelotrichaceae RepID=B0N6V5_9FIRM
udk; uridine kinase
L2_022_000G1_scaffold_568_15
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12233..13477)
DNA (1245bp) protein (415aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDS17542.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDS17542.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RKV0_9FIRM
U32 family peptidase
L2_022_000G1_scaffold_568_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13461..14396)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AK73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47178.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
peptidase U32
L2_022_000G1_scaffold_568_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14393..14992)
DNA (600bp) protein (200aa)
O-methyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N6V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32201.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
O-methyltransferase family protein
L2_022_000G1_scaffold_568_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14994..16043)
DNA (1050bp) protein (350aa)
YceG family protein n=4 Tax=Erysipelotrichaceae RepID=B0N6V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90406.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L2_022_000G1_scaffold_568_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16160..17251)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32199.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_000G1_scaffold_568_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17306..17653)
DNA (348bp) protein (116aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6U9_9FIRM
UPF0473 protein BN521_01101 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_000G1_scaffold_568_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17666..18085)
DNA (420bp) protein (140aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Putative Holliday junction resolvase n=5 Tax=Erysipelotrichaceae RepID=B0N6U8_9FIRM
Holliday junction resolvase-like protein
L2_022_000G1_scaffold_568_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18087..18338)
DNA (252bp) protein (84aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17535.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L2_022_000G1_scaffold_568_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(18399..21008)
DNA (2610bp) protein (870aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=4 Tax=Erysipelotrichaceae RepID=B0N6U6_9FIRM
L2_022_000G1_scaffold_568_24
unknown

Not on your lists

comp(21090..21188)
DNA (99bp) protein (33aa)

This feature has no annotations

L2_022_000G1_scaffold_568_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21290..21403)
DNA (114bp) protein (38aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=G9R4G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90400.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_000G1_scaffold_568_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21430..23625)
DNA (2196bp) protein (732aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Helicase, RecD/TraA family n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N6U5_9FIRM
ATP-dependent exonuclease V subunit alpha
L2_022_000G1_scaffold_568_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23625..24758)
DNA (1134bp) protein (378aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AK83_9FIRM
L2_022_000G1_scaffold_568_28
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24846..25766)
DNA (921bp) protein (307aa)
ROK family protein n=3 Tax=Erysipelotrichaceae RepID=B0N6U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47189.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
glucokinase
L2_022_000G1_scaffold_568_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25829..26815)
DNA (987bp) protein (329aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Pseudouridine synthase n=2 Tax=Erysipelotrichaceae RepID=B0N6U2_9FIRM
pseudouridine synthase
L2_022_000G1_scaffold_568_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27013..27546
DNA (534bp) protein (178aa)
Hydrolase, NUDIX family n=2 Tax=Erysipelotrichaceae RepID=B0N6U1_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDS17529.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
NUDIX hydrolase
Displaying items 1-30 of 54 in total

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