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L2_022_000G1_scaffold_657

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_657_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..179
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UB70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68406.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_022_000G1_scaffold_657_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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244..516
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68407.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_022_000G1_scaffold_657_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

532..912
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B3X5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77343.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_022_000G1_scaffold_657_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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884..2311
DNA (1428bp) protein (476aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3X4_RUMGN
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDN77342.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_022_000G1_scaffold_657_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2293..3213
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3X3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77341.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_022_000G1_scaffold_657_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3253..3810
DNA (558bp) protein (186aa)
SpoVG n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3X2_RUMGN
SpoVG {ECO:0000313|EMBL:EDN77340.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_022_000G1_scaffold_657_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3807..6257
DNA (2451bp) protein (817aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3X1_RUMGN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN77339.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
domain of unknown function DUF1738
L2_022_000G1_scaffold_657_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6463..7767
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3X0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77338.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_022_000G1_scaffold_657_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7771..10038
DNA (2268bp) protein (756aa)
TraG/TraD family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3W9_RUMGN
TraG/TraD family protein {ECO:0000313|EMBL:EDN77337.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
TraG/TraD family protein
L2_022_000G1_scaffold_657_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10197..11306
DNA (1110bp) protein (370aa)
Integrase core domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3W7_RUMGN
Integrase core domain protein {ECO:0000313|EMBL:EDN77335.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
integrase catalytic subunit
L2_022_000G1_scaffold_657_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11569..13767
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67583.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L2_022_000G1_scaffold_657_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13906..14754
DNA (849bp) protein (283aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5UFI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67582.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
bglG2; cryptic beta-glucoside bgl operon antiterminator
L2_022_000G1_scaffold_657_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14851..15492
DNA (642bp) protein (214aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U8W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49347.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_022_000G1_scaffold_657_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15582..15845)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=3 Tax=Clostridiales RepID=F7JUL9_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
SSU ribosomal protein S20P
L2_022_000G1_scaffold_657_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16035..17012
DNA (978bp) protein (326aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
GPR endopeptidase (EC:3.4.24.78)
Germination protease n=4 Tax=Clostridiales RepID=A7B897_RUMGN
L2_022_000G1_scaffold_657_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17022..18251
DNA (1230bp) protein (410aa)
Stage II sporulation protein P n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B898_RUMGN
Stage II sporulation protein P {ECO:0000313|EMBL:EDN75831.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Stage II sporulation protein P (SpoIIP).
L2_022_000G1_scaffold_657_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18349..20271
DNA (1923bp) protein (641aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase, B subunit, C-terminal domain protein n=4 Tax=Clostridiales RepID=A7B899_RUMGN
DNA gyrase, B subunit {ECO:0000313|EMBL:ETD16715.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_022_000G1_scaffold_657_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20301..22544
DNA (2244bp) protein (748aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
DNA gyrase/topoisomerase IV, A subunit n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8A0_RUMGN
L2_022_000G1_scaffold_657_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22950..23417
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=4 Tax=Clostridiales RepID=A7B8A1_RUMGN
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_022_000G1_scaffold_657_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23437..24630
DNA (1194bp) protein (398aa)
Transcription termination factor NusA n=4 Tax=Clostridiales RepID=A7B8A2_RUMGN
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transcription termination factor NusA
L2_022_000G1_scaffold_657_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24653..24931
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67573.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_022_000G1_scaffold_657_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24918..25241
DNA (324bp) protein (108aa)
Ribosomal protein L7Ae n=2 Tax=Clostridiales RepID=A7B8A4_RUMGN
Ribosomal protein L7Ae {ECO:0000313|EMBL:CCZ67572.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
L2_022_000G1_scaffold_657_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25258..27825
DNA (2568bp) protein (856aa)
Translation initiation factor IF-2 n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U8V8_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
bacterial translation initiation factor 2 (bIF-2)
L2_022_000G1_scaffold_657_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27835..28206
DNA (372bp) protein (124aa)
Ribosome-binding factor A n=2 Tax=Clostridiales RepID=A7B8A6_RUMGN
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ribosome-binding factor A
L2_022_000G1_scaffold_657_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28213..29172
DNA (960bp) protein (320aa)
DHHA1 domain protein n=4 Tax=Clostridiales RepID=A7B8A7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67569.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Exopolyphosphatase-related proteins
L2_022_000G1_scaffold_657_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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29194..30114
DNA (921bp) protein (307aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12)
tRNA pseudouridine synthase B n=4 Tax=Clostridiales RepID=A7B8A8_RUMGN
L2_022_000G1_scaffold_657_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30117..31016
DNA (900bp) protein (300aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=4 Tax=Clostridiales RepID=A7B8A9_RUMGN
L2_022_000G1_scaffold_657_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31025..32776
DNA (1752bp) protein (584aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Clostridiales RepID=A7B8B0_RUMGN
helicase Ski2
L2_022_000G1_scaffold_657_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32764..33834
DNA (1071bp) protein (357aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TPL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49330.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
chemotaxis protein CheY
L2_022_000G1_scaffold_657_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33831..35087
DNA (1257bp) protein (419aa)
ABC transporter, solute-binding protein n=4 Tax=Clostridiales RepID=A7B8B2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49329.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
extracellular solute-binding protein
Displaying items 1-30 of 50 in total

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