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L2_022_000G1_scaffold_658

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_658_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(244..795)
DNA (552bp) protein (184aa)
UPF0397 protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFL4_9CLOT
UPF0397 protein CSBG_01112 {ECO:0000256|HAMAP-Rule:MF_01572}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_022_000G1_scaffold_658_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(892..1686)
DNA (795bp) protein (265aa)
Ferredoxin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDI3_9CLOT
Ferredoxin {ECO:0000313|EMBL:EOR27323.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ferredoxin
L2_022_000G1_scaffold_658_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1700..2278)
DNA (579bp) protein (193aa)
Electron transport complex, rnfabcdge type, A subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H445_9CLOT
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rnfA; RnfABCDGE type electron transport complex subunit A
L2_022_000G1_scaffold_658_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2298..2984)
DNA (687bp) protein (229aa)
Electron transport complex, rnfabcdge type, E subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H386_9CLOT
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
nqrD; electron transport complex protein RsxE
L2_022_000G1_scaffold_658_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3007..3618)
DNA (612bp) protein (204aa)
RnfABCDGE type electron transport complex subunit G n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CJI4_9CLOT
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
rnfG; RnfABCDGE type electron transport complex subunit G
L2_022_000G1_scaffold_658_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3621..4505)
DNA (885bp) protein (295aa)
RnfABCDGE type electron transport complex subunit D n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDG5_9CLOT
RnfABCDGE type electron transport complex subunit D {ECO:0000313|EMBL:EOR27327.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
rnfD; rnfD/nqrB
L2_022_000G1_scaffold_658_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4548..5711)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98255.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rnfC; RnfABCDGE type electron transport complex subunit C
L2_022_000G1_scaffold_658_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5994..6758)
DNA (765bp) protein (255aa)
Putative lipoprotein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BWA1_9CLOT
Putative lipoprotein {ECO:0000313|EMBL:EOR21394.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_022_000G1_scaffold_658_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6920..7213)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH71_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS80863.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
nitrous oxide-stimulated promoter family protein
L2_022_000G1_scaffold_658_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7206..7643)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBA0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83828.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_022_000G1_scaffold_658_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7656..9326)
DNA (1671bp) protein (557aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EX07_CLOSG
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIY84135.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_022_000G1_scaffold_658_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9326..11065)
DNA (1740bp) protein (580aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2G1_CLOPF
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY83715.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_022_000G1_scaffold_658_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11268..12713)
DNA (1446bp) protein (482aa)
dbpA; ATP-dependent RNA helicase DbpA (EC:3.6.4.13)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
ATP-dependent RNA helicase DbpA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTH4_CLOSA
L2_022_000G1_scaffold_658_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12852..13919)
DNA (1068bp) protein (356aa)
ABC transporter multidrug-family permease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6L4_9CLOT
ABC transporter multidrug-family permease {ECO:0000313|EMBL:EOR24952.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_022_000G1_scaffold_658_15
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13910..15004)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGA3_9CLOT
Multidrug ABC transporter permease {ECO:0000313|EMBL:KEZ87354.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
putative membrane protein
L2_022_000G1_scaffold_658_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15017..15952)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97962.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_022_000G1_scaffold_658_17
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16038..16679)
DNA (642bp) protein (214aa)
LuxR family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI00028963F4
Uncharacterized protein {ECO:0000313|EMBL:ENZ03500.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
L2_022_000G1_scaffold_658_18
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16683..17834)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2W1_9CLOT
Histidine kinase {ECO:0000313|EMBL:KEZ87357.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
L2_022_000G1_scaffold_658_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17927..19687)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4G0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99350.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase S8 and S53, subtilisin, kexin, sedolisin
L2_022_000G1_scaffold_658_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19684..21510)
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H542_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99349.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase S8/S53 subtilisin kexin sedolisin
L2_022_000G1_scaffold_658_21
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21651..23633)
DNA (1983bp) protein (661aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Hydroxylamine reductase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JGG8_CELLD
hybrid cluster protein
L2_022_000G1_scaffold_658_22
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23653..24327)
DNA (675bp) protein (225aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4L0_9CLOT
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EHJ01585.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
cyclic nucleotide-binding protein
L2_022_000G1_scaffold_658_23
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24424..24672
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6FWZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16620.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L2_022_000G1_scaffold_658_24
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24735..25379)
DNA (645bp) protein (215aa)
PAP2 superfamily protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EH43_CLOPA
PAP2 superfamily
PAP2 superfamily protein {ECO:0000313|EMBL:AGK99123.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_022_000G1_scaffold_658_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25537..26442
DNA (906bp) protein (302aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBV6_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EKY25426.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
oxidoreductase
L2_022_000G1_scaffold_658_26
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26498..27907)
DNA (1410bp) protein (470aa)
Repressor LexA n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2E6U7_9FIRM
LexA repressor {ECO:0000313|EMBL:KAJ53129.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
P-loop ATPase domain fused to LexA-like protein
L2_022_000G1_scaffold_658_27
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28015..28884)
DNA (870bp) protein (290aa)
Ion channel family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V0X1_CLOBI
Ion channel protein {ECO:0000313|EMBL:KGJ50566.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
Ion channel family
L2_022_000G1_scaffold_658_28
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28937..29668)
DNA (732bp) protein (244aa)
Putative yoxB n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSQ9_CLOBI
Putative yoxB {ECO:0000313|EMBL:EQK44140.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L2_022_000G1_scaffold_658_29
unknown

Not on your lists

comp(29738..29911)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_022_000G1_scaffold_658_30
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29982..30719
DNA (738bp) protein (246aa)
Carbohydrate deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01246};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G6T8_CLOPA
hypothetical protein
Displaying items 1-30 of 46 in total

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