ggKbase home page

L2_022_000G1_scaffold_760

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_760_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102..371)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C218_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78103.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Phage-like protein endonuclease-like protein
L2_022_000G1_scaffold_760_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(443..640)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C213_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78098.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_022_000G1_scaffold_760_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

839..1096
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM48571.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_022_000G1_scaffold_760_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1275..2288
DNA (1014bp) protein (338aa)
Site-specific recombinase, phage integrase family n=2 Tax=Clostridiales RepID=G9YRT1_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI78096.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
integrase family protein
L2_022_000G1_scaffold_760_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2580..3605
DNA (1026bp) protein (342aa)
Peptidase, M23 family n=2 Tax=Clostridiales RepID=G9YM87_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:ERI77655.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative metalloendopeptidase
L2_022_000G1_scaffold_760_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3606..4205
DNA (600bp) protein (200aa)
Peptidase, M50 family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YM88_9FIRM
Peptidase, M50 family {ECO:0000313|EMBL:EHM54230.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
peptidase M50 family protein
L2_022_000G1_scaffold_760_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4343..4684
DNA (342bp) protein (114aa)
50S ribosomal protein L19 n=3 Tax=Clostridiales RepID=G9YM89_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rplS; 50S ribosomal protein L19
L2_022_000G1_scaffold_760_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4940..6946
DNA (2007bp) protein (669aa)
Amidohydrolase family protein n=3 Tax=Clostridiales RepID=G9YM90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35526.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_760_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7070..7954
DNA (885bp) protein (295aa)
Ribosome biogenesis GTPase A n=3 Tax=Clostridiales RepID=H1C7G0_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative GTP-binding protein
L2_022_000G1_scaffold_760_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7941..8555
DNA (615bp) protein (205aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=Clostridiales RepID=G9YM92_9FIRM
L2_022_000G1_scaffold_760_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8552..8923
DNA (372bp) protein (124aa)
UPF0102 protein HMPREF0372_00614 n=3 Tax=Clostridiales RepID=G9YM93_9FIRM
UPF0102 protein HMPREF0995_00386 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_760_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8936..9901
DNA (966bp) protein (322aa)
membrane dipeptidase (EC:3.4.13.19)
Renal dipeptidase family protein n=2 Tax=Clostridiales RepID=U2C0U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35522.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_022_000G1_scaffold_760_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9889..11376
DNA (1488bp) protein (496aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55749.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_022_000G1_scaffold_760_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11377..12057
DNA (681bp) protein (227aa)
Ser/Thr phosphatase family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YM96_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EHM54238.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative hydrolase
L2_022_000G1_scaffold_760_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12178..13596
DNA (1419bp) protein (473aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Trigger factor n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DDS2_9CLOT
tig; trigger factor
L2_022_000G1_scaffold_760_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13700..14281
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=3 Tax=Clostridiales RepID=G9YM98_9FIRM
L2_022_000G1_scaffold_760_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14355..15671
DNA (1317bp) protein (439aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=3 Tax=Clostridiales RepID=G9YM99_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
L2_022_000G1_scaffold_760_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15756..18167
DNA (2412bp) protein (804aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7F1_9FIRM
L2_022_000G1_scaffold_760_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18177..18776
DNA (600bp) protein (200aa)
GTPase (EC:3.6.1.-)
Probable GTP-binding protein EngB n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BZM4_9CLOT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_022_000G1_scaffold_760_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18773..19540
DNA (768bp) protein (256aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
FAH family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DDS8_9CLOT
FAH family protein {ECO:0000313|EMBL:ERI77671.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_022_000G1_scaffold_760_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19643..20353
DNA (711bp) protein (237aa)
Peptidase, M50 family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMA3_9FIRM
Peptidase, M50 family {ECO:0000313|EMBL:EHM54245.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
peptidase M50B family protein
L2_022_000G1_scaffold_760_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20419..21174
DNA (756bp) protein (252aa)
ScpA/B protein n=3 Tax=Clostridiales RepID=G9YMA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35512.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
scpA; chromosome segregation and condensation protein ScpA
L2_022_000G1_scaffold_760_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21184..21843
DNA (660bp) protein (220aa)
Segregation and condensation protein B n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7E6_9FIRM
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
scpB; chromosome segregation and condensation protein ScpB
L2_022_000G1_scaffold_760_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21850..22485
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YMA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55738.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_022_000G1_scaffold_760_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22489..22893
DNA (405bp) protein (135aa)
Sporulation protein YtfJ n=2 Tax=Clostridiales RepID=G9YMA7_9FIRM
Sporulation protein YtfJ {ECO:0000313|EMBL:EHO35509.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_760_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22934..24085
DNA (1152bp) protein (384aa)
dacB; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Clostridiales RepID=G9YMA8_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ERI77677.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_022_000G1_scaffold_760_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24102..24794
DNA (693bp) protein (231aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rsuB; pseudouridine synthase RsuB (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7E2_9FIRM
L2_022_000G1_scaffold_760_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24938..25807
DNA (870bp) protein (290aa)
SIS domain protein n=3 Tax=Clostridiales RepID=G9YMB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35506.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RpiR family transcriptional regulator
L2_022_000G1_scaffold_760_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25804..27051
DNA (1248bp) protein (416aa)
Flavoprotein family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BZN6_9CLOT
Flavoprotein family protein {ECO:0000313|EMBL:ERI77680.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_022_000G1_scaffold_760_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27048..27728
DNA (681bp) protein (227aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=3 Tax=Clostridiales RepID=G9YMB2_9FIRM
Displaying items 1-30 of 48 in total

View Taxonomy