ggKbase home page

L2_022_000G1_scaffold_837

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_837_1
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(534..2504)
DNA (1971bp) protein (657aa)
SusD family protein n=5 Tax=Bacteroides RepID=C6Z8Z9_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFV68588.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L2_022_000G1_scaffold_837_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2529..5729)
DNA (3201bp) protein (1067aa)
TonB-dependent receptor plug domain protein n=2 Tax=Bacteroides vulgatus RepID=D4VB05_BACVU
hypothetical protein
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS45045.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_022_000G1_scaffold_837_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5764..6048)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NY47_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17635.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L2_022_000G1_scaffold_837_4
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6097..6651)
DNA (555bp) protein (185aa)
ECF-type sigma factor n=6 Tax=Bacteroides RepID=A6L4E4_BACV8
ECF-type sigma factor
ECF-type sigma factor {ECO:0000313|EMBL:EFV68585.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_022_000G1_scaffold_837_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6838..9924)
DNA (3087bp) protein (1029aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9ULM4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY83571.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_022_000G1_scaffold_837_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9926..11608)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=2 Tax=root RepID=I9A882_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY83572.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
polysaccharide lyase 1
L2_022_000G1_scaffold_837_7
unknown

Not on your lists

11667..11891
DNA (225bp) protein (75aa)

This feature has no annotations

L2_022_000G1_scaffold_837_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11807..12439)
DNA (633bp) protein (211aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L4E1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS45050.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_022_000G1_scaffold_837_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12500..14233)
DNA (1734bp) protein (578aa)
Polysaccharide lyase family 1, candidate pectate lyase n=6 Tax=Bacteroides RepID=A6L4E0_BACV8
Uncharacterized protein {ECO:0000313|EMBL:EOS04904.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
polysaccharide lyase 1, pectate lyase
L2_022_000G1_scaffold_837_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14402..16258)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A731_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY83575.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_022_000G1_scaffold_837_11
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16279..19734)
DNA (3456bp) protein (1152aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=C6Z908_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFV68579.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L2_022_000G1_scaffold_837_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19764..20648)
DNA (885bp) protein (295aa)
AP endonuclease, family 2 n=2 Tax=Bacteroides RepID=C6Z909_9BACE
AP endonuclease, family 2 {ECO:0000313|EMBL:EET17368.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_022_000G1_scaffold_837_13
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20814..25217)
DNA (4404bp) protein (1468aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides RepID=C6Z910_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EET17369.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
two-component system sensor histidine kinase/response regulator, hybrid
L2_022_000G1_scaffold_837_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25343..27967)
DNA (2625bp) protein (875aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VB16_BACVU
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EFG16953.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
glycoside hydrolase
L2_022_000G1_scaffold_837_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28800..30929
DNA (2130bp) protein (710aa)
Tex-like protein N-terminal domain protein n=5 Tax=Bacteroides RepID=C6Z917_9BACE
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EOS04889.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
RNA-binding protein
L2_022_000G1_scaffold_837_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30952..31749
DNA (798bp) protein (266aa)
Hydrolase, NUDIX family n=2 Tax=Bacteroides vulgatus RepID=D4VB20_BACVU
NUDIX domain protein {ECO:0000313|EMBL:KDS45062.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
NADH pyrophosphatase
L2_022_000G1_scaffold_837_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31826..33487
DNA (1662bp) protein (554aa)
TrkA-C domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VB21_BACVU
AspT/YidE/YbjL antiporter duplication domain protein {ECO:0000313|EMBL:KDS45063.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_022_000G1_scaffold_837_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33497..35497
DNA (2001bp) protein (667aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Fructose-1,6-bisphosphatase class 3 n=4 Tax=Bacteroides RepID=C6Z920_9BACE
fructose-1,6-bisphosphatase
L2_022_000G1_scaffold_837_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35627..35977)
DNA (351bp) protein (117aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Aspartate 1-decarboxylase n=14 Tax=Bacteroides RepID=PAND_BACV8
aspartate decarboxylase
L2_022_000G1_scaffold_837_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35999..36847)
DNA (849bp) protein (283aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Pantothenate synthetase n=12 Tax=Bacteroides RepID=PANC_BACV8
pantoate--beta-alanine ligase
L2_022_000G1_scaffold_837_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37200..38024
DNA (825bp) protein (275aa)
Glycosyltransferase family 5 n=7 Tax=Bacteroides RepID=A6L4C2_BACV8
glycosyl transferase family protein
Starch synthase catalytic domain protein {ECO:0000313|EMBL:KDS32413.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_022_000G1_scaffold_837_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38044..39474
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLH4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS45068.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_022_000G1_scaffold_837_23
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39724..40101)
DNA (378bp) protein (126aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=A6L4C0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEO44065.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
L2_022_000G1_scaffold_837_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40255..41379
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
DNA polymerase III subunit beta n=7 Tax=Bacteroides RepID=A6L4B9_BACV8
DNA polymerase III subunit beta
L2_022_000G1_scaffold_837_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41431..42207
DNA (777bp) protein (259aa)
DNA Pol III epsilon chain n=13 Tax=Bacteroides RepID=A6L4B8_BACV8
DNA polymerase III subunit epsilon
Exonuclease family protein {ECO:0000313|EMBL:KDS45071.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_022_000G1_scaffold_837_26
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42204..43400
DNA (1197bp) protein (399aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EET17388.2}; EC=4.1.1.36 {ECO:0000313|EMBL:EET17388.2};; EC=6.3.2.5 {ECO:0000313|EMBL:EET17388.2};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=5 Tax=root RepID=C6Z929_9BACE
flavoprotein
L2_022_000G1_scaffold_837_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43516..45177
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=6 Tax=Bacteroides RepID=A6L4B6_BACV8
DNA repair protein recN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_022_000G1_scaffold_837_28
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45228..45995
DNA (768bp) protein (256aa)
tRNA/rRNA methyltransferase n=5 Tax=Bacteroides RepID=A6L4B5_BACV8
tRNA/rRNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EET17390.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_022_000G1_scaffold_837_29
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46032..47732
DNA (1701bp) protein (567aa)
Tetratricopeptide repeat protein n=4 Tax=Bacteroides RepID=C6Z932_9BACE
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:EFV68608.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_022_000G1_scaffold_837_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47871..49175)
DNA (1305bp) protein (435aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A751_BACVU
tRNA(Ile)-lysidine synthetase
Displaying items 1-30 of 31 in total

View Taxonomy