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L2_022_000G1_scaffold_880

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_880_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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258..1199
DNA (942bp) protein (314aa)
Stage III sporulation protein AA n=3 Tax=Lachnospiraceae RepID=A7AY93_RUMGN
Stage III sporulation protein AA {ECO:0000313|EMBL:EGN44138.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
stage III sporulation protein AA
L2_022_000G1_scaffold_880_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1187..1705
DNA (519bp) protein (173aa)
Stage III sporulation protein AB n=3 Tax=Clostridiales RepID=V8BPC6_RUMGN
Putative stage III sporulation protein AB {ECO:0000313|EMBL:CCZ66752.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
stage III sporulation protein SpoAB
L2_022_000G1_scaffold_880_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1742..1936
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=4 Tax=Clostridiales RepID=A7AY95_RUMGN
Stage III sporulation protein AC {ECO:0000313|EMBL:EGN44136.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
stage III sporulation protein AC
L2_022_000G1_scaffold_880_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1951..2337
DNA (387bp) protein (129aa)
Stage III sporulation protein AD n=4 Tax=Clostridiales RepID=V8BNC2_RUMGN
Putative stage III sporulation protein AD {ECO:0000313|EMBL:CCZ66754.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
stage III sporulation protein AD
L2_022_000G1_scaffold_880_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2334..3482
DNA (1149bp) protein (383aa)
Stage III sporulation protein AE n=2 Tax=Lachnospiraceae RepID=V8BPH1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44134.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Stage III sporulation protein AE (spore_III_AE).
L2_022_000G1_scaffold_880_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3499..3831
DNA (333bp) protein (111aa)
Stage III sporulation protein AF n=3 Tax=Lachnospiraceae RepID=V8BQA5_RUMGN
Stage III sporulation protein AF {ECO:0000313|EMBL:ETD16671.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Stage III sporulation protein AF (Spore_III_AF).
L2_022_000G1_scaffold_880_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3821..4426
DNA (606bp) protein (202aa)
Stage III sporulation protein AG n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BPC1_RUMGN
Stage III sporulation protein AG {ECO:0000313|EMBL:ETD16670.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_022_000G1_scaffold_880_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4450..5082
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AYA0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44131.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_880_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5165..6757
DNA (1593bp) protein (531aa)
Peptide chain release factor 3 n=3 Tax=Clostridiales RepID=F7K187_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
bacterial peptide chain release factor 3 (bRF-3)
L2_022_000G1_scaffold_880_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6840..7232
DNA (393bp) protein (131aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AYA2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44129.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_000G1_scaffold_880_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7370..7768
DNA (399bp) protein (133aa)
N utilization substance protein B homolog n=3 Tax=Clostridiales RepID=F7K185_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcription antitermination factor NusB
L2_022_000G1_scaffold_880_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7787..9004
DNA (1218bp) protein (406aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease VII, large subunit n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BPB5_RUMGN
L2_022_000G1_scaffold_880_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9016..9234
DNA (219bp) protein (73aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Exodeoxyribonuclease 7 small subunit n=3 Tax=Clostridiales RepID=F7K182_9FIRM
exonuclease VII small subunit
L2_022_000G1_scaffold_880_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9224..10114
DNA (891bp) protein (297aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNB2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16663.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_022_000G1_scaffold_880_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10128..12002
DNA (1875bp) protein (625aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Lachnospiraceae RepID=F7K180_9FIRM
1-deoxy-D-xylulose-5-phosphate synthase
L2_022_000G1_scaffold_880_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12004..12810
DNA (807bp) protein (269aa)
Ribosomal RNA large subunit methyltransferase J n=3 Tax=Lachnospiraceae RepID=A7AYA9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44122.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hemolysin TlyA family protein
L2_022_000G1_scaffold_880_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12821..13660
DNA (840bp) protein (280aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted sugar kinase (EC:2.7.1.23)
Uncharacterized protein n=3 Tax=Clostridiales RepID=V8BPB3_RUMGN
L2_022_000G1_scaffold_880_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13665..14123
DNA (459bp) protein (153aa)
Arginine repressor n=4 Tax=Clostridiales RepID=A7AYB1_RUMGN
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, ArgR family
L2_022_000G1_scaffold_880_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14132..15805
DNA (1674bp) protein (558aa)
DNA repair protein RecN n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BNA7_RUMGN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA replication and repair protein RecN
L2_022_000G1_scaffold_880_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15898..16956
DNA (1059bp) protein (353aa)
stage IV sporulation protein B (EC:3.4.21.116)
Stage IV sporulation protein B n=2 Tax=Lachnospiraceae RepID=F7K174_9FIRM
Stage IV sporulation protein B {ECO:0000313|EMBL:ETD16657.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_022_000G1_scaffold_880_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17066..17857
DNA (792bp) protein (264aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TM45_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L2_022_000G1_scaffold_880_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17950..19398
DNA (1449bp) protein (483aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase n=4 Tax=Clostridiales RepID=A7AYB5_RUMGN
L2_022_000G1_scaffold_880_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19425..20294
DNA (870bp) protein (290aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=3 Tax=Clostridiales RepID=A7AYB6_RUMGN
L2_022_000G1_scaffold_880_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20306..20956
DNA (651bp) protein (217aa)
Vitamin B12 dependent methionine synthase, activation domain. (EC:2.1.1.13)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TM11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44112.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_022_000G1_scaffold_880_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20953..23370
DNA (2418bp) protein (806aa)
B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. (EC:2.1.1.13)
Methionine synthase n=1 Tax=Ruminococcus gnavus CC55_001C PF0_RUMGN">RepID=V8BPF0_RUMGN
Methionine synthase {ECO:0000313|EMBL:ETD16652.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_022_000G1_scaffold_880_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23399..24919
DNA (1521bp) protein (507aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TM49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66785.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Iron only hydrogenase large subunit, C-terminal domain
L2_022_000G1_scaffold_880_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25036..27675
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYC0_RUMGN
L2_022_000G1_scaffold_880_28
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27801..27977
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G1H5_9FIRM
SSU ribosomal protein S21P
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
L2_022_000G1_scaffold_880_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28284..29621
DNA (1338bp) protein (446aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=4 Tax=Clostridiales RepID=A7AYC2_RUMGN
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_022_000G1_scaffold_880_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29953..33744
DNA (3792bp) protein (1264aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPE5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45421.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 50 in total

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