ggKbase home page

L2_022_000G1_scaffold_905

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_905_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1073)
DNA (1071bp) protein (357aa)
Putative DEAD/DEAH box helicase domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ELA3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84841.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_022_000G1_scaffold_905_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1175..1639
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F8N3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL06774.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_022_000G1_scaffold_905_3
unknown

Not on your lists

comp(1712..2011)
DNA (300bp) protein (100aa)

This feature has no annotations

L2_022_000G1_scaffold_905_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2333..3307
DNA (975bp) protein (325aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LPV3_9CLOT
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:AGF54900.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_905_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3282..4034
DNA (753bp) protein (251aa)
ABC transporter, permease protein n=2 Tax=Clostridium botulinum B RepID=B2TNC2_CLOBB
binding--dependent transport system inner membrane component family protein
ABC transporter, permease protein {ECO:0000313|EMBL:ACD23365.1}; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:CDH91444.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_022_000G1_scaffold_905_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4046..4717
DNA (672bp) protein (224aa)
ssuB1; aliphatic sulfonates import ATP-binding protein SsuB 2 (EC:3.6.3.-)
UPI0003D66C85 related cluster n=1 Tax=unknown RepID=UPI0003D66C85
ABC transporter {ECO:0000313|EMBL:KHD15631.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_022_000G1_scaffold_905_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4743..6449
DNA (1707bp) protein (569aa)
lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:EES48133.1}; EC=3.6.3.- {ECO:0000313|EMBL:EES48133.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V5F6_CLOBA
L2_022_000G1_scaffold_905_8
unknown

Not on your lists

6564..6791
DNA (228bp) protein (76aa)

This feature has no annotations

L2_022_000G1_scaffold_905_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6880..7194
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Clostridium colicanis 209318 RepID=N9WHR0_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
trxA; thioredoxin
L2_022_000G1_scaffold_905_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7201..8055
DNA (855bp) protein (285aa)
UPI0003D59403 related cluster n=1 Tax=unknown RepID=UPI0003D59403
Thioredoxin reductase {ECO:0000313|EMBL:KHD13857.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
pyridine nucleotide-disulfide oxidoreductase family protein
L2_022_000G1_scaffold_905_11
unknown

Not on your lists

8220..8372
DNA (153bp) protein (51aa)

This feature has no annotations

L2_022_000G1_scaffold_905_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8491..9414
DNA (924bp) protein (308aa)
peptidase S15 n=1 Tax=Clostridium sp. JC122 RepID=UPI00028862E0
X-Pro dipeptidyl-peptidase family protein
X-Pro dipeptidyl-peptidase family protein {ECO:0000313|EMBL:AIY82747.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_022_000G1_scaffold_905_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9716..10882)
DNA (1167bp) protein (389aa)
Site-specific recombinase XerD n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MTL5_9CLOT
xerD10; site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AGF59463.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_905_14
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10959..11417)
DNA (459bp) protein (153aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Clostridium sp. SS2/1 RepID=B0P3B1_9CLOT
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EDS20824.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L2_022_000G1_scaffold_905_15
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11434..11850)
DNA (417bp) protein (139aa)
Immunity repressor protein n=1 Tax=Clostridium intestinale URNW RepID=U2PZC9_9CLOT
Immunity repressor protein {ECO:0000313|EMBL:ERK31875.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
immunity repressor protein
L2_022_000G1_scaffold_905_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12088..12294
DNA (207bp) protein (69aa)
Putative conjugative transposon egulatory protein n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TMD4_CLOBB
conjugative transposon egulatory protein
Putative conjugative transposon egulatory protein {ECO:0000313|EMBL:ACD23668.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_022_000G1_scaffold_905_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12308..12601
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CB94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR24456.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_022_000G1_scaffold_905_18
unknown

Not on your lists

12614..12826
DNA (213bp) protein (71aa)

This feature has no annotations

L2_022_000G1_scaffold_905_19
unknown

Not on your lists

12827..13138
DNA (312bp) protein (104aa)

This feature has no annotations

L2_022_000G1_scaffold_905_20
unknown

Not on your lists

13139..13360
DNA (222bp) protein (74aa)

This feature has no annotations

L2_022_000G1_scaffold_905_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13375..13935
DNA (561bp) protein (187aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI73_9FIRM
sigF; RNA polymerase sigma-F factor
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDC67516.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_022_000G1_scaffold_905_22
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13932..14351
DNA (420bp) protein (140aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q144_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EKP94654.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
sporulation transcriptional regulator SpoIIID
L2_022_000G1_scaffold_905_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14412..14921
DNA (510bp) protein (170aa)
Phage protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5USU0_CLOBO
Bacteriophage Mu Gam like family protein {ECO:0000313|EMBL:AIY78581.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L2_022_000G1_scaffold_905_24
unknown

Not on your lists

14932..15249
DNA (318bp) protein (106aa)

This feature has no annotations

L2_022_000G1_scaffold_905_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15266..15886
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTT2_CLOSA
Uncharacterized protein {ECO:0000313|EMBL:KHD16008.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_022_000G1_scaffold_905_26
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15889..16221
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5USU5_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KJZ96948.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L2_022_000G1_scaffold_905_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16223..16810
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5USU6_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KJZ83235.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_022_000G1_scaffold_905_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16869..17480
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5USU8_CLOBO
ERCC4 domain protein {ECO:0000313|EMBL:AIY80365.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L2_022_000G1_scaffold_905_29
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17458..17931
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LTS1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56435.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_000G1_scaffold_905_30
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17925..18401
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MNY1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56436.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Displaying items 1-30 of 52 in total

View Taxonomy