ggKbase home page

L2_022_000G1_scaffold_1038

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_1038_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..485)
DNA (483bp) protein (161aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Escherichia coli RepID=UPI00035FE309
livJ; leucine/isoleucine/valine transporter subunit ; periplasmic-binding component of ABC superfamily
Leu/Ile/Val-binding protein {ECO:0000313|EMBL:ELD96188.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L2_022_000G1_scaffold_1038_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1342..1815
DNA (474bp) protein (158aa)
PTS system, IIA component n=106 Tax=Escherichia RepID=D5D329_ECOKI
PTS system transporter subunit IIA
PTS system protein {ECO:0000313|EMBL:EQX25088.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_022_000G1_scaffold_1038_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1822..2307
DNA (486bp) protein (162aa)
EIIAB-Man n=105 Tax=Escherichia RepID=T2MXA3_ECOLX
PTS system mannose/fructose-specific transporter subunit IIA
PTS system protein {ECO:0000313|EMBL:EQX25089.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_022_000G1_scaffold_1038_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2324..3070
DNA (747bp) protein (249aa)
PTS system, IIC component n=109 Tax=Escherichia RepID=D5D330_ECOKI
PTS system transporter subunit IIC
PTS system protein {ECO:0000313|EMBL:EQX25090.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_022_000G1_scaffold_1038_5
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3063..3917
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli O1:K1 / APEC RepID=A1AGZ5_ECOK1
PTS system transporter subunit IID
Putative phosphotransferase system enzyme IID {ECO:0000313|EMBL:CDC76106.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_022_000G1_scaffold_1038_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3919..4839
DNA (921bp) protein (307aa)
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ABE09403.1}; EC=1.1.1.29 {ECO:0000313|EMBL:ABE09403.1};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Phosphoglycerate dehydrogenase n=4 Tax=Escherichia coli RepID=T6XQR5_ECOLX
D-isomer specific 2-hydroxyacid dehydrogenase family protein
L2_022_000G1_scaffold_1038_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4839..5723
DNA (885bp) protein (295aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|SAAS:SAAS00086366}; EC=4.-.-.- {ECO:0000256|SAAS:SAAS00278209};; EC=4.3.3.7 {ECO:0000256|SAAS:SAAS00086421};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Dihydrodipicolinate synthase n=103 Tax=Escherichia RepID=Q7X387_ECOLX
L2_022_000G1_scaffold_1038_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5827..6681)
DNA (855bp) protein (285aa)
RNA polymerase sigma factor RpoH n=1377 Tax=Enterobacteriaceae RepID=RPOH_ECO57
rpoH; alternative sigma factor RpoH
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L2_022_000G1_scaffold_1038_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6926..7984)
DNA (1059bp) protein (353aa)
Cell division protein FtsX n=1181 Tax=Enterobacteriaceae RepID=FTSX_ECOL6
ftsX; putative protein insertion permease FtsX
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L2_022_000G1_scaffold_1038_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7977..8645)
DNA (669bp) protein (223aa)
Cell division ATP-binding protein FtsE n=1333 Tax=Enterobacteriaceae RepID=FTSE_ECO57
cell division protein FtsE
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EKJ12656.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
L2_022_000G1_scaffold_1038_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8648..10144)
DNA (1497bp) protein (499aa)
Signal recognition particle receptor FtsY n=4 Tax=Escherichia coli RepID=T7RMG2_ECOLX
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
cell division protein
L2_022_000G1_scaffold_1038_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10294..10890
DNA (597bp) protein (199aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
Ribosomal RNA small subunit methyltransferase D n=840 Tax=Enterobacteriaceae RepID=RSMD_ECOL6
rsmD; 16S rRNA m(2)G966-methyltransferase
L2_022_000G1_scaffold_1038_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10880..11149
DNA (270bp) protein (90aa)
Uncharacterized protein n=1266 Tax=Enterobacteriaceae RepID=B7L5R9_ECO55
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EGI13915.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_022_000G1_scaffold_1038_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11152..11511)
DNA (360bp) protein (120aa)
Uncharacterized protein yhhM n=423 Tax=Escherichia RepID=E2QFX1_ECOLX
yhhM; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ72234.1}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
L2_022_000G1_scaffold_1038_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11652..12278
DNA (627bp) protein (209aa)
Uncharacterized membrane protein YhhN n=1200 Tax=Enterobacteriaceae RepID=YHHN_ECO57
yhhN; hypothetical protein
Membrane protein {ECO:0000313|EMBL:EZA37472.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L2_022_000G1_scaffold_1038_16
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12352..14550
DNA (2199bp) protein (733aa)
Lead, cadmium, zinc and mercury-transporting ATPase n=1 Tax=Escherichia coli UMEA 3108-1 RepID=T8QZV4_ECOLX
Lead cadmium zinc and mercury transporting ATPase {ECO:0000313|EMBL:CDC76138.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
zinc-transporting ATPase
L2_022_000G1_scaffold_1038_17
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14652..14897)
DNA (246bp) protein (82aa)
Sulfurtransferase TusA {ECO:0000256|HAMAP-Rule:MF_00413}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00413};; tRNA 2-thiouridine synthesizing protein A {ECO:0000256|HAMAP-Rule:MF_00413}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
Sulfurtransferase TusA n=1304 Tax=Enterobacteriaceae RepID=TUSA_ECO24
sirA; sulfur transfer protein SirA
L2_022_000G1_scaffold_1038_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15118..15783
DNA (666bp) protein (222aa)
Inner membrane protein yhhQ n=387 Tax=Escherichia RepID=E2QFX5_ECOLX
yhhQ; hypothetical protein
Inner membrane protein yhhQ {ECO:0000313|EMBL:EZJ35858.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_022_000G1_scaffold_1038_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15856..16413
DNA (558bp) protein (186aa)
Protein dcrB n=286 Tax=Bacteria RepID=E2QFX6_ECOLX
hypothetical protein
Protein dcrB {ECO:0000313|EMBL:EQP45212.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_022_000G1_scaffold_1038_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16417..17676)
DNA (1260bp) protein (420aa)
UPF0226 membrane protein A1W3_03904 n=1 Tax=Escherichia coli KTE84 RepID=L4EPX7_ECOLX
UPF0226 membrane protein ECIG_02726 {ECO:0000256|HAMAP-Rule:MF_01118}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
yhhS; hypothetical protein
L2_022_000G1_scaffold_1038_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17766..18815
DNA (1050bp) protein (350aa)
Pheromone autoinducer 2 transporter n=32 Tax=Escherichia coli RepID=V8LCQ7_ECOLX
tqsA; pheromone autoinducer 2 transporter
Permease {ECO:0000313|EMBL:AJO85525.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_022_000G1_scaffold_1038_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18870..19457
DNA (588bp) protein (196aa)
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:CDL48357.1}; EC=2.7.8.- {ECO:0000313|EMBL:CDL48357.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Holo-syntase 2 n=29 Tax=Escherichia coli RepID=G0D541_ECOLX
acpT; holo-syntase 2
L2_022_000G1_scaffold_1038_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19367..19543)
DNA (177bp) protein (59aa)
Uncharacterized protein n=53 Tax=Enterobacteriaceae RepID=J7QWV4_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQN23485.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L2_022_000G1_scaffold_1038_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19568..21142
DNA (1575bp) protein (525aa)
Nickel-binding periplasmic protein n=336 Tax=Escherichia RepID=E2QFY0_ECOLX
Nickel ABC transporter, periplasmic nickel-binding protein {ECO:0000313|EMBL:EHU04997.1}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1A.;"
nikA; nickel ABC transporter subunit periplasmic-binding protein
L2_022_000G1_scaffold_1038_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21142..22086
DNA (945bp) protein (315aa)
Nickel ABC transporter, permease subunit NikB {ECO:0000313|EMBL:KEN96882.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KEN96882.1};; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
Nickel transport system permease protein NikB n=655 Tax=Enterobacteriaceae RepID=NIKB_ECOLI
nikB; nickel transporter permease NikB
L2_022_000G1_scaffold_1038_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22083..22916
DNA (834bp) protein (278aa)
Nickel transporter subunit membrane component of ABC superfamily n=43 Tax=Enterobacteriaceae RepID=B7N1R6_ECO81
nikC; nickel transporter permease NikC
Nickel transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CAR10286.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L2_022_000G1_scaffold_1038_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22916..23680
DNA (765bp) protein (255aa)
nikD; nickel ABC transporter, ATP-binding protein NikD (EC:3.6.3.24)
Nickel import ATP-binding protein NikD {ECO:0000256|HAMAP-Rule:MF_01711}; EC=3.6.3.24 {ECO:0000256|HAMAP-Rule:MF_01711};; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
Nickel import ATP-binding protein NikD n=229 Tax=Escherichia RepID=NIKD_ECOL5
L2_022_000G1_scaffold_1038_28
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23677..24483
DNA (807bp) protein (269aa)
Nickel import ATP-binding protein NikE {ECO:0000256|HAMAP-Rule:MF_01712}; EC=3.6.3.24 {ECO:0000256|HAMAP-Rule:MF_01712};; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
Nickel import ATP-binding protein NikE n=322 Tax=Escherichia RepID=NIKE_ECOL5
nikE; nickel transport ATP-binding protein NikE
L2_022_000G1_scaffold_1038_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24489..24890
DNA (402bp) protein (134aa)
Nickel-responsive regulator n=1363 Tax=cellular organisms RepID=NIKR_ECO24
nikR; nickel responsive regulator
Nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=910348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P12b.;"
L2_022_000G1_scaffold_1038_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24954..25049)
DNA (96bp) protein (32aa)
Uncharacterized protein n=72 Tax=Escherichia coli RepID=E0R5S9_ECOLX
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN84221.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Displaying items 1-30 of 76 in total

View Taxonomy