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L2_022_000G1_scaffold_1128

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_1128_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1758
DNA (1758bp) protein (586aa)
glnD; PII uridylyl-transferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Escherichia coli W26 RepID=I0VZ83_ECOLX
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
L2_022_000G1_scaffold_1128_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1789..2613
DNA (825bp) protein (275aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=424 Tax=Escherichia RepID=DAPD_ECO27
L2_022_000G1_scaffold_1128_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2923..3309
DNA (387bp) protein (129aa)
UPF0325 protein YaeH n=1417 Tax=Enterobacteriaceae RepID=YAEH_ECO24
hypothetical protein
UPF0325 protein YaeH {ECO:0000256|HAMAP-Rule:MF_01519}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L2_022_000G1_scaffold_1128_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3363..4520)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=725 Tax=Enterobacteriaceae RepID=J7QM72_ECOLX
cdaR; carbohydrate diacid transcriptional activator CdaR
Carbohydrate diacid regulator {ECO:0000313|EMBL:ESD23344.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L2_022_000G1_scaffold_1128_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4675..6099)
DNA (1425bp) protein (475aa)
Serine endoprotease n=33 Tax=Escherichia coli RepID=G0DA20_ECOLX
serine endoprotease
HtrA protease/chaperone protein {ECO:0000313|EMBL:CDL46815.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L2_022_000G1_scaffold_1128_6
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6229..7746)
DNA (1518bp) protein (506aa)
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00030}; Short=dGTP triphosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00030};; Short=dGTPase {ECO:0000256|HAMAP-Rule:MF_00030};; EC=3.1.5.1 {ECO:0000256|HAMAP-Rule:MF_00030};; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
dgt; deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase n=7 Tax=Escherichia RepID=L2XLU0_ECOLX
L2_022_000G1_scaffold_1128_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7830..8528
DNA (699bp) protein (233aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684, ECO:0000256|SAAS:SAAS00035261}; Short=MTA/SAH nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684};; Short=MTAN {ECO:0000256|HAMAP-Rule:MF_01684};; EC=3.2.2.9 {ECO:0000256|HAMAP-Rule:MF_01684, ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684}; S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1205 Tax=Enterobacteriaceae RepID=MTNN_ECO24
mtnN; MTA/SAH nucleosidase MtnN
L2_022_000G1_scaffold_1128_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8521..9321
DNA (801bp) protein (267aa)
Vitamin B12-binding protein n=21 Tax=Enterobacteriaceae RepID=Q32JV0_SHIDS
yadT; vitamin B12-transporter protein BtuF
Vitamin B12-binding protein {ECO:0000256|HAMAP-Rule:MF_01000}; Flags: Precursor;; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_022_000G1_scaffold_1128_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9359..9982
DNA (624bp) protein (208aa)
UPF0126 inner membrane protein YadS n=1137 Tax=Enterobacteriaceae RepID=YADS_ECOL6
yadS; putative membrane protein YadS
Uncharacterized protein {ECO:0000313|EMBL:KEJ62989.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L2_022_000G1_scaffold_1128_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10029..10373)
DNA (345bp) protein (115aa)
Iron-sulfur cluster insertion protein ErpA n=2 Tax=Escherichia RepID=F0JQU2_ESCFE
erpA; iron-sulfur cluster insertion protein ErpA
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=1116069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.5.;"
L2_022_000G1_scaffold_1128_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10455..11876)
DNA (1422bp) protein (474aa)
H(+)/Cl(-) exchange transporter ClcA n=359 Tax=Enterobacteriaceae RepID=CLCA_ECO57
H/Cl exchange transporter clcA
H(+)/Cl(-) exchange transporter ClcA {ECO:0000256|HAMAP-Rule:MF_01128, ECO:0000256|SAAS:SAAS00010065}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_022_000G1_scaffold_1128_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12101..13381
DNA (1281bp) protein (427aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=316 Tax=Escherichia RepID=GSA_ECO27
L2_022_000G1_scaffold_1128_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13416..15398)
DNA (1983bp) protein (661aa)
Ferrichrome-iron ABC transporter permease component n=41 Tax=Escherichia coli RepID=D2NBW8_ECOS5
ferrichrome-iron ABC transporter permease component
Uncharacterized protein {ECO:0000313|EMBL:AJO82091.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_022_000G1_scaffold_1128_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15395..16285)
DNA (891bp) protein (297aa)
Ferrichrome-binding periplasmic protein n=287 Tax=Escherichia RepID=E2QF81_ECOLX
ferrichrome-iron ABC transporter substrate binding component
Iron(3+)-hydroxamate-binding protein fhuD {ECO:0000313|EMBL:EQX91192.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L2_022_000G1_scaffold_1128_15
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16285..17082)
DNA (798bp) protein (266aa)
Ferrichrome-iron ABC transporter ATP-binding component n=41 Tax=Escherichia RepID=D2NBW6_ECOS5
iron-hydroxamate transporter ATP-binding protein
Ferrichrome-iron ABC transporter ATP-binding component {ECO:0000313|EMBL:CDC85004.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_022_000G1_scaffold_1128_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17133..19382)
DNA (2250bp) protein (750aa)
Ferrichrome-iron receptor n=46 Tax=Escherichia RepID=D2NBW5_ECOS5
ferrichrome-iron receptor
Ferrichrome-iron receptor {ECO:0000313|EMBL:BAI53707.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_022_000G1_scaffold_1128_17
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19602..20612)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Escherichia coli CAG:4 RepID=R6USN6_9ESCH
Uncharacterized protein {ECO:0000313|EMBL:CDC84999.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
putative fimbrial usher protein
L2_022_000G1_scaffold_1128_18
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20634..23111)
DNA (2478bp) protein (826aa)
Outer membrane usher protein LpfC n=1 Tax=Escherichia coli CAG:4 RepID=R6VRP1_9ESCH
Outer membrane usher protein LpfC {ECO:0000313|EMBL:CDC84997.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
membrane protein
L2_022_000G1_scaffold_1128_19
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23178..23894)
DNA (717bp) protein (239aa)
Uncharacterized protein n=9 Tax=Escherichia RepID=L2XKU4_ECOLX
Putative type I fimbrial chaperone {ECO:0000313|EMBL:CDC84995.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
putative type I fimbrial chaperone
L2_022_000G1_scaffold_1128_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23940..24506)
DNA (567bp) protein (189aa)
Minor fimbrial subunit HifD n=48 Tax=Escherichia RepID=F4ST28_ECOLX
fimbrial family protein
Minor fimbrial subunit HifD {ECO:0000313|EMBL:EGI18161.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_022_000G1_scaffold_1128_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24847..27372)
DNA (2526bp) protein (842aa)
mrcB; penicillin-binding protein 1b (EC:2.4.1.129)
Penicillin-binding protein 1b n=27 Tax=Escherichia coli RepID=G0D9A2_ECOLX
Bifunctional glycosyl transferase/transpeptidase {ECO:0000313|EMBL:AJO82083.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_022_000G1_scaffold_1128_22
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27466..28530)
DNA (1065bp) protein (355aa)
ATP-dependent RNA helicase hrpB n=2 Tax=Escherichia coli RepID=T7R2N9_ECOLX
ATP-dependent RNA helicase {ECO:0000313|EMBL:CDC84987.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
RNA helicase
L2_022_000G1_scaffold_1128_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28476..29735)
DNA (1260bp) protein (420aa)
ATP-dependent RNA helicase hrpB n=7 Tax=Escherichia coli RepID=L3G8M1_ECOLX
ATP-dependent helicase
ATP-dependent helicase {ECO:0000313|EMBL:BAI53701.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_022_000G1_scaffold_1128_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29809..30339
DNA (531bp) protein (177aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
2'-5' RNA ligase n=103 Tax=Escherichia RepID=E2QF77_ECOLX
2'-5' RNA ligase
L2_022_000G1_scaffold_1128_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30354..31058
DNA (705bp) protein (235aa)
Sugar fermentation stimulation protein A n=151 Tax=Escherichia coli RepID=SFSA_ECOLU
sfsA; sugar fermentation stimulation protein
Sugar fermentation stimulation protein A {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L2_022_000G1_scaffold_1128_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31580..32506
DNA (927bp) protein (309aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
Glutamyl-Q tRNA(Asp) synthetase n=141 Tax=Escherichia RepID=E2QF74_ECOLX
glutamyl-Q tRNA(Asp) synthetase
L2_022_000G1_scaffold_1128_27
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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32599..33963
DNA (1365bp) protein (455aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1282358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri Shi06HN006.;"
Poly(A) polymerase I n=53 Tax=Enterobacteriaceae RepID=D2NBV4_ECOS5
pcnB; poly(A) polymerase I,Poly(A) polymerase precursor,poly(A) polymerase I,poly(A) polymerase,Polymerase A arginine-rich C-terminus
L2_022_000G1_scaffold_1128_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33960..34439
DNA (480bp) protein (160aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:KEJ62969.1}; EC=2.7.6.3 {ECO:0000313|EMBL:KEJ62969.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase n=45 Tax=Escherichia coli RepID=D2NBV3_ECOS5
L2_022_000G1_scaffold_1128_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34796..35380
DNA (585bp) protein (195aa)
Fimbrial protein n=45 Tax=Escherichia coli RepID=U9ZIP3_ECOLX
yadN; Putative fimbrial protein
Putative fimbrial subunit YadN {ECO:0000313|EMBL:EGI18152.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_022_000G1_scaffold_1128_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35476..36216
DNA (741bp) protein (247aa)
Chaperone ecpD n=41 Tax=Escherichia coli RepID=L2XJJ2_ECOLX
putative pilin chaperone
Chaperone protein EcpD {ECO:0000313|EMBL:AJO82075.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Displaying items 1-30 of 56 in total

View Taxonomy