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L2_022_000G1_scaffold_643

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_643_1
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1263..5582)
DNA (4320bp) protein (1440aa)
CoA-substrate-specific enzyme activase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9J6_9CLOT
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CDE11530.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
CoA-substrate-specific enzyme activase
L2_022_000G1_scaffold_643_2
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5737..6309
DNA (573bp) protein (191aa)
Lipoprotein LpqB GerMN domain protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FA42_9CLOT
Lipoprotein LpqB GerMN domain protein {ECO:0000313|EMBL:CDE11531.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L2_022_000G1_scaffold_643_3
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6306..6446)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FCS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11532.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L2_022_000G1_scaffold_643_4
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6448..7260
DNA (813bp) protein (271aa)
Methyltransferase type 11 n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAL9_9CLOT
Methyltransferase type 11 {ECO:0000313|EMBL:CDE11533.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
methyltransferase small
L2_022_000G1_scaffold_643_5
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7270..8097
DNA (828bp) protein (276aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9K1_9CLOT
S-adenosylmethionine-dependent methyltransferase, YraL family
L2_022_000G1_scaffold_643_6
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8163..8414)
DNA (252bp) protein (84aa)
Transcriptional regulator AbrB family n=1 Tax=Clostridium sp. CAG:354 RepID=R7FCS5_9CLOT
Transcriptional regulator AbrB family {ECO:0000313|EMBL:CDE11537.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L2_022_000G1_scaffold_643_7
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8578..9069
DNA (492bp) protein (164aa)
Uncharacterized membrane protein required for spore maturation in B.subtilis n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9K7_9CLOT
Uncharacterized membrane protein required for spore maturation in B.subtilis {ECO:0000313|EMBL:CDE11540.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
spmA; spore maturation protein A
L2_022_000G1_scaffold_643_8
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9160..9684
DNA (525bp) protein (175aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FCT1_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDE11542.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L2_022_000G1_scaffold_643_9
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9977..10459)
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8B9_9CLOT
hypothetical protein
L2_022_000G1_scaffold_643_10
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10572..11363)
DNA (792bp) protein (264aa)
Beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FA59_9CLOT
Beta-lactamase domain protein {ECO:0000313|EMBL:CDE11546.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
beta-lactamase-like protein
L2_022_000G1_scaffold_643_11
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11382..12644)
DNA (1263bp) protein (421aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8C4_9CLOT
L2_022_000G1_scaffold_643_12
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12778..13419)
DNA (642bp) protein (214aa)
Stage II sporulation protein R n=1 Tax=Clostridium sp. CAG:354 RepID=R7FA63_9CLOT
Stage II sporulation protein R {ECO:0000313|EMBL:CDE11551.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
stage II sporulation protein R
L2_022_000G1_scaffold_643_13
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13599..14117
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11553.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L2_022_000G1_scaffold_643_14
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14210..15451
DNA (1242bp) protein (414aa)
UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9M6_9CLOT
UDP-N-acetylglucosamine pyrophosphorylase {ECO:0000313|EMBL:CDE11555.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
UDP-N-acetylglucosamine pyrophosphorylase
L2_022_000G1_scaffold_643_15
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15511..17235
DNA (1725bp) protein (575aa)
pgcA; Phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Clostridium sp. CAG:354 RepID=R7FCU7_9CLOT
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:CDE11557.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L2_022_000G1_scaffold_643_16
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17259..17597)
DNA (339bp) protein (113aa)
Transcriptional regulator XRE family n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8D2_9CLOT
Transcriptional regulator XRE family {ECO:0000313|EMBL:CDE11559.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
merR; MerR family transcriptional regulator
L2_022_000G1_scaffold_643_17
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17701..18411)
DNA (711bp) protein (237aa)
Putative ATPase of the PP-loop superfamily implicated in cell cycle control n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9N1_9CLOT
Putative ATPase of the PP-loop superfamily implicated in cell cycle control {ECO:0000313|EMBL:CDE11560.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
ExsB family protein
L2_022_000G1_scaffold_643_18
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18668..19153
DNA (486bp) protein (162aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Clostridium sp. CAG:354 RepID=R7FCW2_9CLOT
Probable Zn dependent nucleoside deaminase
L2_022_000G1_scaffold_643_19
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19143..19886
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9P6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11575.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L2_022_000G1_scaffold_643_20
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20036..21712
DNA (1677bp) protein (559aa)
DNA polymerase III subunits gamma and tau n=1 Tax=Clostridium sp. CAG:354 RepID=R7FA84_9CLOT
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:CDE11576.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
DNA polymerase III subunits gamma and tau
L2_022_000G1_scaffold_643_21
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21730..22074
DNA (345bp) protein (115aa)
Nucleoid-associated protein BN623_01094 n=1 Tax=Clostridium sp. CAG:354 RepID=R7FCX0_9CLOT
Nucleoid-associated protein BN623_01094 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
transcriptional regulatory protein
L2_022_000G1_scaffold_643_22
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22084..22698
DNA (615bp) protein (205aa)
Recombination protein RecR n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAR9_9CLOT
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
recombination protein RecR
L2_022_000G1_scaffold_643_23
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22680..23417
DNA (738bp) protein (246aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8E9_9CLOT
tRNA pseudouridine synthase a
L2_022_000G1_scaffold_643_24
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23500..23928
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9Q1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11580.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L2_022_000G1_scaffold_643_25
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23943..24179
DNA (237bp) protein (79aa)
S4 domain protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FA88_9CLOT
S4 domain protein {ECO:0000313|EMBL:CDE11581.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
ribosome-associated heat shock protein implicated in the recycling of the 50S subunit S4-like protein
L2_022_000G1_scaffold_643_26
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24180..24509)
DNA (330bp) protein (110aa)
Predicted transcriptional regulator n=1 Tax=Clostridium sp. CAG:354 RepID=R7FCX5_9CLOT
Predicted transcriptional regulator {ECO:0000313|EMBL:CDE11582.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
transcriptional regulator
L2_022_000G1_scaffold_643_27
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24730..26973
DNA (2244bp) protein (748aa)
pflB; formate acetyltransferase (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAS3_9CLOT
Formate C-acetyltransferase {ECO:0000313|EMBL:CDE11583.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L2_022_000G1_scaffold_643_28
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27051..27770
DNA (720bp) protein (240aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8F5_9CLOT
pyruvate formate-lyase activating enzyme
L2_022_000G1_scaffold_643_29
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27839..28693)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9Q6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11585.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L2_022_000G1_scaffold_643_30
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


28961..29245
DNA (285bp) protein (95aa)
30S ribosomal protein S6 n=1 Tax=Clostridium sp. CAG:354 RepID=R7FA91_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
30S ribosomal protein S6
Displaying items 1-30 of 46 in total

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