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L2_022_000G1_scaffold_1176

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000G1_scaffold_1176_1
unknown

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1..234
DNA (234bp) protein (78aa)

This feature has no annotations

L2_022_000G1_scaffold_1176_2
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(793..1335)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WWT1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62721.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
membrane protein
L2_022_000G1_scaffold_1176_3
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1497..2888)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XFK6_9PORP
transglycosylase
Transglycosylase {ECO:0000313|EMBL:AHF13148.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L2_022_000G1_scaffold_1176_4
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2902..3513)
DNA (612bp) protein (204aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007563}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007538};; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
uridine/cytidine kinase (EC:2.7.1.48)
Uridine kinase n=3 Tax=Porphyromonadaceae RepID=G9S303_9PORP
L2_022_000G1_scaffold_1176_5
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3639..4805)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=3 Tax=Porphyromonadaceae RepID=R7DJD4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD90694.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
phosphoribosylformylglycinamidine cyclo-ligase
L2_022_000G1_scaffold_1176_6
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5238..6434)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I9H0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY38660.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
hypothetical protein
L2_022_000G1_scaffold_1176_7
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6431..7075)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:51 RepID=R7DH80_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD89750.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
ABC transporter ATP-binding protein
L2_022_000G1_scaffold_1176_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7082..8467)
DNA (1386bp) protein (462aa)
Putative lipoprotein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNC8_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CDD25158.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_022_000G1_scaffold_1176_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9031..12207)
DNA (3177bp) protein (1059aa)
Uncharacterized protein n=2 Tax=root RepID=I8ZD40_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY72827.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
TonB-dependent receptor plug
L2_022_000G1_scaffold_1176_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12232..14487)
DNA (2256bp) protein (752aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TT99_BACVU
histidine kinase
L2_022_000G1_scaffold_1176_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14625..17402)
DNA (2778bp) protein (926aa)
Uncharacterized protein n=2 Tax=root RepID=I8ZBH2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY72825.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
histidine kinase
L2_022_000G1_scaffold_1176_12
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17946..19472)
DNA (1527bp) protein (509aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S786_9PORP
Amino acid transporter {ECO:0000313|EMBL:KHM48598.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
glutamate/gamma-aminobutyrate anti-porter
L2_022_000G1_scaffold_1176_13
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19664..20434
DNA (771bp) protein (257aa)
Uncharacterized protein n=3 Tax=Porphyromonadaceae RepID=R7DF31_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD89015.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
potassium channel protein
L2_022_000G1_scaffold_1176_14
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20454..21419)
DNA (966bp) protein (322aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
glutaminase (EC:3.5.1.2)
Glutaminase n=1 Tax=Tannerella sp. CAG:118 RepID=R5IE22_9PORP
L2_022_000G1_scaffold_1176_15
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21483..22907)
DNA (1425bp) protein (475aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
Glutamate decarboxylase n=3 Tax=Porphyromonadaceae RepID=U5CM00_9PORP
glutamate decarboxylase
L2_022_000G1_scaffold_1176_16
unknown

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comp(22904..23005)
DNA (102bp) protein (34aa)

This feature has no annotations

L2_022_000G1_scaffold_1176_17
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23152..24381
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AWM9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB58028.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
sugar transporter
L2_022_000G1_scaffold_1176_18
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24391..25347
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IIH6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY36712.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
putative permease
L2_022_000G1_scaffold_1176_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25382..25789
DNA (408bp) protein (136aa)
TIGR03987 family protein n=4 Tax=Bacteroides RepID=E4VYM2_BACFG
TIGR03987 family protein {ECO:0000313|EMBL:EFR54556.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
hypothetical protein
L2_022_000G1_scaffold_1176_20
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(25881..26735)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H5P5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB93484.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
aldo/keto reductase
L2_022_000G1_scaffold_1176_21
unknown

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comp(26831..27004)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_022_000G1_scaffold_1176_22
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27099..27362
DNA (264bp) protein (88aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Tannerella sp. CAG:51 RepID=R7DGW8_9PORP
Displaying 22 items

View Taxonomy