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L2_022_000M1_scaffold_1172

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_1172_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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160..393
DNA (234bp) protein (78aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=E5CC19_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY60966.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L2_022_000M1_scaffold_1172_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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796..2292
DNA (1497bp) protein (499aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=7 Tax=Bacteroides RepID=A7M3B6_BACOV
L2_022_000M1_scaffold_1172_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2374..3768
DNA (1395bp) protein (465aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=6 Tax=Bacteroides RepID=A7M3B5_BACOV
L2_022_000M1_scaffold_1172_4
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3810..4406
DNA (597bp) protein (199aa)
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
3-isopropylmalate dehydratase, small subunit n=17 Tax=Bacteroides RepID=D6CWT0_9BACE
L2_022_000M1_scaffold_1172_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4388..5935
DNA (1548bp) protein (516aa)
(R)-citramalate synthase (EC:2.3.3.13 2.3.3.-)
LeuA allosteric (Dimerization) domain protein n=5 Tax=Bacteroides RepID=A7M3B3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY60962.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L2_022_000M1_scaffold_1172_6
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5996..7057
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase {ECO:0000256|RuleBase:RU004445, ECO:0000256|SAAS:SAAS00089855}; EC=1.1.1.85 {ECO:0000256|RuleBase:RU004445, ECO:0000256|SAAS:SAAS00089855};; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=2 Tax=Bacteroides RepID=D7KAE0_9BACE
L2_022_000M1_scaffold_1172_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7139..7828)
DNA (690bp) protein (230aa)
PAP2 family protein n=5 Tax=Bacteroides RepID=A7M3B1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY60960.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
PAP2 superfamily.
L2_022_000M1_scaffold_1172_8
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7925..9760)
DNA (1836bp) protein (612aa)
Arylsulfatase {ECO:0000313|EMBL:EEO52057.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEO52057.1};; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Arylsulfatase n=4 Tax=Bacteroides RepID=D0TXD1_9BACE
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L2_022_000M1_scaffold_1172_9
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9892..10932
DNA (1041bp) protein (347aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Cysteine synthase n=5 Tax=Bacteroides RepID=D6CWS5_9BACE
L2_022_000M1_scaffold_1172_10
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10874..11563
DNA (690bp) protein (230aa)
Tetratricopeptide repeat n=5 Tax=Bacteroides RepID=D6CWS4_9BACE
Tetratricopeptide repeat.
TPR-repeat-containing protein {ECO:0000313|EMBL:EFI14714.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L2_022_000M1_scaffold_1172_11
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11770..13596)
DNA (1827bp) protein (609aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=4 Tax=Bacteroides RepID=D4VF93_9BACE
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EFI14715.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L2_022_000M1_scaffold_1172_12
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13849..14313
DNA (465bp) protein (155aa)
Transcriptional regulator, AraC family n=16 Tax=Bacteroides RepID=D6CWS2_9BACE
transcriptional regulator, AraC family
Uncharacterized protein {ECO:0000313|EMBL:CDB58198.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L2_022_000M1_scaffold_1172_13
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14409..16457
DNA (2049bp) protein (683aa)
Dipeptidyl-peptidase III {ECO:0000313|EMBL:CDM03309.1}; EC=3.4.14.4 {ECO:0000313|EMBL:CDM03309.1};; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
Peptidase family M49. (EC:3.4.14.4)
Peptidase family M49 n=4 Tax=Bacteroides RepID=C3QJB8_9BACE
L2_022_000M1_scaffold_1172_14
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16464..17129
DNA (666bp) protein (222aa)
DNA alkylation repair enzyme n=8 Tax=Bacteroides RepID=D6CWS0_9BACE
DNA alkylation repair enzyme.
Uncharacterized protein {ECO:0000313|EMBL:EIY84225.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L2_022_000M1_scaffold_1172_15
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17386..17874
DNA (489bp) protein (163aa)
Fe2+/Zn2+ uptake regulation proteins n=8 Tax=Bacteroides RepID=D6CWR9_9BACE
Fe2+/Zn2+ uptake regulation proteins
Ferric uptake regulator protein {ECO:0000313|EMBL:EFI14719.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L2_022_000M1_scaffold_1172_16
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17871..18998
DNA (1128bp) protein (376aa)
Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Adenylosuccinate synthetase n=15 Tax=Bacteroides RepID=D6CWR8_9BACE
L2_022_000M1_scaffold_1172_17
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19108..20406
DNA (1299bp) protein (433aa)
Alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=3 Tax=Bacteroides RepID=D6CWR7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97359.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L2_022_000M1_scaffold_1172_18
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20669..21118
DNA (450bp) protein (150aa)
Predicted Zn-dependent protease n=17 Tax=Bacteroides RepID=D6CWR6_9BACE
Predicted Zn-dependent protease
Uncharacterized protein {ECO:0000313|EMBL:EKJ92719.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
L2_022_000M1_scaffold_1172_19
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21359..21475
DNA (117bp) protein (39aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Histidine--tRNA ligase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6B7E0_9BACE
Histidyl tRNA synthetase suspected. See adjacent gene [L2_022_000M1_scaffold_1172_20].
L2_022_000M1_scaffold_1172_20
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


21447..22583
DNA (1137bp) protein (379aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=4 Tax=Bacteroides RepID=C3QJB2_9BACE
L2_022_000M1_scaffold_1172_21
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22726..23916)
DNA (1191bp) protein (397aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UNG5_9BACE
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:EIY84231.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
iron-only hydrogenase maturation protein HydF
L2_022_000M1_scaffold_1172_22
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23928..25349)
DNA (1422bp) protein (474aa)
Iron-only hydrogenase maturation rSAM protein HydG n=4 Tax=Bacteroides RepID=C3QJB0_9BACE
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CDM03317.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
thiH; thiamine biosynthesis protein ThiH
L2_022_000M1_scaffold_1172_23
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25402..26478)
DNA (1077bp) protein (359aa)
Biotin synthase and related enzymes (EC:2.8.1.6)
Radical SAM domain protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JHS3_9BACE
Radical SAM domain protein {ECO:0000313|EMBL:CDB58179.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L2_022_000M1_scaffold_1172_24
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26459..27907)
DNA (1449bp) protein (483aa)
Iron only hydrogenase large subunit, C-terminal domain n=6 Tax=Bacteroides RepID=D6CWR0_9BACE
Iron only hydrogenase large subunit, C-terminal domain
Iron only hydrogenase large subunit C-terminal domain {ECO:0000313|EMBL:CDB58178.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L2_022_000M1_scaffold_1172_25
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28076..28249
DNA (174bp) protein (58aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=D0TXE7_9BACE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI14728.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L2_022_000M1_scaffold_1172_26
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28320..28868
DNA (549bp) protein (183aa)
Hydrolase, NUDIX family n=6 Tax=Bacteroides RepID=C3QJA6_9BACE
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEZ01840.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
two-component system sensor histidine kinase
L2_022_000M1_scaffold_1172_27
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28928..29635
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7J170_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI14730.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L2_022_000M1_scaffold_1172_28
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30046..31095)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QJA4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO52038.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
hypothetical protein
L2_022_000M1_scaffold_1172_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31340..31429
DNA (90bp) protein (30aa)
10 kDa chaperonin n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PN26_9BACE
10 kDa chaperonin
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
Displaying 29 items

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