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L2_022_000M1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 145 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_22_1
unknown

Not on your lists

2..1042
DNA (1041bp) protein (347aa)

This feature has no annotations

L2_022_000M1_scaffold_22_2
unknown

Not on your lists

1116..2399
DNA (1284bp) protein (428aa)

This feature has no annotations

L2_022_000M1_scaffold_22_3
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2582..2974
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=root RepID=R6WWX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC98577.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein
L2_022_000M1_scaffold_22_4
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3154..4410)
DNA (1257bp) protein (419aa)
7-keto-8-aminopelargonate synthetase-like enzyme n=1 Tax=Alistipes sp. CAG:268 RepID=R6VME4_9BACT
7-keto-8-aminopelargonate synthetase-like enzyme
7-keto-8-aminopelargonate synthetase-like enzyme {ECO:0000313|EMBL:CDC99788.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
L2_022_000M1_scaffold_22_5
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4621..5151)
DNA (531bp) protein (177aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase n=3 Tax=root RepID=R6VID5_9BACT
L2_022_000M1_scaffold_22_6

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comp(5170..5847)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000319939B
TPR domain-containing protein {ECO:0000313|EMBL:EKC59406.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_022_000M1_scaffold_22_7
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5967..6257)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6VXJ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC96716.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein
L2_022_000M1_scaffold_22_8
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6254..7342)
DNA (1089bp) protein (363aa)
DNA replication and repair protein RecF n=2 Tax=root RepID=R6WRG6_9BACT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
DNA replication and repair protein RecF
L2_022_000M1_scaffold_22_9
unknown

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7411..7530
DNA (120bp) protein (40aa)

This feature has no annotations

L2_022_000M1_scaffold_22_10
unknown

Not on your lists

7592..8515
DNA (924bp) protein (308aa)

This feature has no annotations

L2_022_000M1_scaffold_22_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8823..9755)
DNA (933bp) protein (311aa)
multidrug transporter n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000304DDD7
Permeases of the drug/metabolite transporter (DMT) superfamily
Permeases of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:CBK64519.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_022_000M1_scaffold_22_12
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10329..10793)
DNA (465bp) protein (155aa)
translation initiation factor IF-3 n=1 Tax=Alistipes sp. JC136 RepID=UPI000289E159
Translation initiation factor IF-3 {ECO:0000313|EMBL:CCZ95783.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
translation initiation factor IF-3
L2_022_000M1_scaffold_22_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10965..12926)
DNA (1962bp) protein (654aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=3 Tax=root RepID=B0MU07_9BACT
L2_022_000M1_scaffold_22_14
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12995..14089)
DNA (1095bp) protein (365aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=3 Tax=Alistipes RepID=I3YKH9_ALIFI
L2_022_000M1_scaffold_22_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14273..15505
DNA (1233bp) protein (411aa)
Tetratricopeptide repeat protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JPU2_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDE64892.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L2_022_000M1_scaffold_22_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15718..16500)
DNA (783bp) protein (261aa)
RNA methyltransferase, TrmH family n=2 Tax=root RepID=B0MU00_9BACT
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EDS04720.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
rRNA methylase
L2_022_000M1_scaffold_22_17
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16497..17456)
DNA (960bp) protein (320aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Ribonuclease Z n=3 Tax=root RepID=B0MU01_9BACT
beta-lactamase superfamily metal-dependent hydrolase
L2_022_000M1_scaffold_22_18
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17528..18457)
DNA (930bp) protein (310aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=2 Tax=root RepID=R6VGV9_9BACT
L2_022_000M1_scaffold_22_19
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18487..19488)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JLU6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64884.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L2_022_000M1_scaffold_22_20
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19491..20348)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=root RepID=B0MSK6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04726.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_022_000M1_scaffold_22_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20352..22079)
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000381EE2C
Uncharacterized protein {ECO:0000313|EMBL:CDD25464.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000M1_scaffold_22_22
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22116..23378)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSK9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04729.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
unusual protein kinase
L2_022_000M1_scaffold_22_23
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23414..23953)
DNA (540bp) protein (180aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=root RepID=B0MSL0_9BACT
FKBP-type peptidyl-prolyl cis-trans isomerase
L2_022_000M1_scaffold_22_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24203..27034)
DNA (2832bp) protein (944aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycine dehydrogenase n=1 Tax=Alistipes sp. JC136 RepID=UPI000288D34A
glycine dehydrogenase, decarboxylating
L2_022_000M1_scaffold_22_25
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27079..28752)
DNA (1674bp) protein (558aa)
Uridine kinase (EC:2.7.1.48)
Phosphoribulokinase/uridine kinase family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMI9_9BACT
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:CDE64876.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L2_022_000M1_scaffold_22_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28822..30243
DNA (1422bp) protein (474aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases (EC:3.1.3.5)
Ser/Thr protein phosphatase n=1 Tax=Alistipes onderdonkii RepID=UPI00035FFEA8
5'-nucleotidase/2' 3'-cyclic phosphodiesterase-like hydrolase {ECO:0000313|EMBL:CDD25459.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_022_000M1_scaffold_22_27
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


30456..32273
DNA (1818bp) protein (606aa)
30S ribosomal protein S1 n=3 Tax=Alistipes RepID=I3YKG4_ALIFI
30S ribosomal protein S1
Ribosomal protein S1 {ECO:0000313|EMBL:AFL77482.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_22_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32771..34882
DNA (2112bp) protein (704aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDS02763.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDS02763.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYS7_9BACT
L2_022_000M1_scaffold_22_29
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34909..35718
DNA (810bp) protein (270aa)
Uncharacterized protein n=5 Tax=root RepID=B0MYS5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64652.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Protein of unknown function (DUF3108).
L2_022_000M1_scaffold_22_30
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35752..36681
DNA (930bp) protein (310aa)
Uncharacterized protein n=4 Tax=root RepID=B0MYS4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02760.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
Displaying items 1-30 of 145 in total

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