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L2_022_000M1_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_26_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..603)
DNA (603bp) protein (201aa)
Restriction endonuclease S subunit n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIZ8_ALIFI
restriction endonuclease S subunit
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EXZ79586.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_022_000M1_scaffold_26_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(603..2009)
DNA (1407bp) protein (469aa)
Virulence protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIZ9_ALIFI
virulence protein
Virulence RhuM family protein {ECO:0000313|EMBL:EXZ79585.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_022_000M1_scaffold_26_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2017..3570)
DNA (1554bp) protein (518aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EXZ74284.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EXZ74284.1};; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
Type I restriction system adenine methylase HsdM n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ00_ALIFI
type I restriction system adenine methylase HsdM
L2_022_000M1_scaffold_26_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3575..4279)
DNA (705bp) protein (235aa)
T5orf172 domain-containing protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ01_ALIFI
T5orf172 domain-containing protein
Meiotically up-regulated protein 113 family protein {ECO:0000313|EMBL:EXZ79583.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_022_000M1_scaffold_26_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4293..7121)
DNA (2829bp) protein (943aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ02_ALIFI
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:AFL76970.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
HsdR family type I site-specific deoxyribonuclease
L2_022_000M1_scaffold_26_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7539..8600)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ04_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:EXZ79580.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
hypothetical protein
L2_022_000M1_scaffold_26_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8627..10000)
DNA (1374bp) protein (458aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ05_ALIFI
ATPase (AAA+ superfamily)
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:AFL76973.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_26_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11233..15063
DNA (3831bp) protein (1277aa)
SEC-C motif domain protein n=2 Tax=Bacteroidales RepID=I3YJ07_ALIFI
SEC-C motif domain protein {ECO:0000313|EMBL:AFL76975.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
SEC-C motif domain-containing protein
L2_022_000M1_scaffold_26_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15432..16157
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ08_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76976.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_26_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16325..16450
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:EXZ79573.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_022_000M1_scaffold_26_11
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17092..17298
DNA (207bp) protein (69aa)
DNA-binding helix-turn-helix protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QWN2_9BACT
transcriptional regulator
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EGG51937.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
L2_022_000M1_scaffold_26_12
unknown

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17412..17549
DNA (138bp) protein (46aa)

This feature has no annotations

L2_022_000M1_scaffold_26_13
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17696..19528
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YYB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA21592.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
Type I restriction-modification system methyltransferase subunit
L2_022_000M1_scaffold_26_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19522..20892
DNA (1371bp) protein (457aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9RHS8_BACFG
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EYE46620.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
type I restriction endonuclease subunit R
L2_022_000M1_scaffold_26_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20895..21494
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8WWS1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY50285.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
L2_022_000M1_scaffold_26_16
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21527..23830
DNA (2304bp) protein (768aa)
AAA domain protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YA54_9BACE
AAA domain protein {ECO:0000313|EMBL:CDA21594.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
L2_022_000M1_scaffold_26_17
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23993..26788
DNA (2796bp) protein (932aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:754 RepID=R6D656_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA83200.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
Uncharacterized conserved protein (DUF2075)./Protein of unknown function (DUF2726).
L2_022_000M1_scaffold_26_18
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26862..27794
DNA (933bp) protein (311aa)
Restriction endonuclease n=1 Tax=Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014) RepID=E4T9F7_RIEAD
Restriction endonuclease {ECO:0000313|EMBL:EWH09822.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
restriction endonuclease
L2_022_000M1_scaffold_26_19
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27914..28954)
DNA (1041bp) protein (347aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
DNA polymerase IV n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YM76_ALIFI
nucleotidyltransferase/DNA polymerase
L2_022_000M1_scaffold_26_20
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29298..29570)
DNA (273bp) protein (91aa)
Putative DNA-binding protein HU n=4 Tax=Bacteroidetes RepID=F3QPG5_9BACT
Putative DNA-binding protein HU {ECO:0000313|EMBL:EHG99222.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
Bacterial nucleoid DNA-binding protein
L2_022_000M1_scaffold_26_21
unknown

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29630..29785
DNA (156bp) protein (52aa)

This feature has no annotations

L2_022_000M1_scaffold_26_22
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29904..30338
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UCL1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75745.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_022_000M1_scaffold_26_23

Not on your lists

comp(30458..30961)
DNA (504bp) protein (168aa)
Protein containing Thioesterase superfamily domain protein {ECO:0000313|EMBL:EKC65944.1}; EC=3.1.2.23 {ECO:0000313|EMBL:EKC65944.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Protein containing Thioesterase superfamily domain protein n=1 Tax=human gut metagenome RepID=K1TEU6_9ZZZZ
hypothetical protein
L2_022_000M1_scaffold_26_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31242..32525
DNA (1284bp) protein (428aa)
Small-conductance mechanosensitive channel n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y308_9BACT
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:CDD25684.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
small-conductance mechanosensitive channel
L2_022_000M1_scaffold_26_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32530..33483
DNA (954bp) protein (318aa)
d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADQ79556.1}; EC=1.1.1.26 {ECO:0000313|EMBL:ADQ79556.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4B2_PALPW
L2_022_000M1_scaffold_26_26
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(33546..35207)
DNA (1662bp) protein (554aa)
transporter n=1 Tax=Alistipes sp. JC136 RepID=UPI0002881A4C
Predicted permease
Predicted permease {ECO:0000313|EMBL:CBK64694.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_022_000M1_scaffold_26_27
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35348..35725
DNA (378bp) protein (126aa)
membrane protein n=1 Tax=Bacteroides gallinarum RepID=UPI000370D0F2
membrane protein
Membrane protein {ECO:0000313|EMBL:AHF11629.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L2_022_000M1_scaffold_26_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(35960..37309)
DNA (1350bp) protein (450aa)
Outer membrane efflux protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMK5_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:CDE64147.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
outer membrane protein
L2_022_000M1_scaffold_26_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37328..38425)
DNA (1098bp) protein (366aa)
RND transporter MFP subunit n=1 Tax=Alistipes sp. JC136 RepID=UPI000288A426
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD25687.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
RND family efflux transporter MFP subunit
L2_022_000M1_scaffold_26_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38448..39695)
DNA (1248bp) protein (416aa)
ABC-type antimicrobial peptide transport system, permease component n=2 Tax=Alistipes RepID=I3YIS6_ALIFI
antimicrobial peptide ABC transporter permease
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AFL76894.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Displaying items 1-30 of 132 in total

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