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L2_022_000M1_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 145 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_30_1
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..579)
DNA (579bp) protein (193aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
glucose-1-phosphate thymidylyltransferase n=2 Tax=Alistipes onderdonkii RepID=UPI0003784336
glucose-1-phosphate thymidylyltransferase
L2_022_000M1_scaffold_30_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(641..1813)
DNA (1173bp) protein (391aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XS29_9BACT
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:CDD26498.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
L2_022_000M1_scaffold_30_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1895..2800)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z7P2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26497.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000M1_scaffold_30_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2856..3470)
DNA (615bp) protein (205aa)
Transcription antiterminator n=1 Tax=Alistipes sp. CAG:29 RepID=R6YD39_9BACT
Transcription antiterminator {ECO:0000313|EMBL:CDD26496.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcription antiterminator
L2_022_000M1_scaffold_30_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3872..5083)
DNA (1212bp) protein (404aa)
Site-specific recombinase XerD n=2 Tax=Alistipes RepID=R6XY04_9BACT
Site-specific recombinase XerD {ECO:0000313|EMBL:CDD26495.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
site-specific recombinase XerD
L2_022_000M1_scaffold_30_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5535..6830)
DNA (1296bp) protein (432aa)
Putative membrane protein n=2 Tax=Alistipes RepID=R6Y573_9BACT
Putative membrane protein {ECO:0000313|EMBL:CDD26494.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000M1_scaffold_30_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6840..7883)
DNA (1044bp) protein (348aa)
porin n=1 Tax=Alistipes onderdonkii RepID=UPI00037657A7
Phosphate-selective porin O and P {ECO:0000313|EMBL:CDD26493.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Phosphate-selective porin O and P
L2_022_000M1_scaffold_30_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8287..8967)
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R6Z7L6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26492.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ABC transporter
L2_022_000M1_scaffold_30_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9009..11444)
DNA (2436bp) protein (812aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000364E2C4
Uncharacterized protein {ECO:0000313|EMBL:CDD26491.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transporter permease
L2_022_000M1_scaffold_30_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11451..13808)
DNA (2358bp) protein (786aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000380C2A7
Uncharacterized protein {ECO:0000313|EMBL:CDD26489.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ABC transporter membrane protein
L2_022_000M1_scaffold_30_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13821..16202)
DNA (2382bp) protein (794aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036D50AB
Uncharacterized protein {ECO:0000313|EMBL:CDD26488.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ABC transporter permease
L2_022_000M1_scaffold_30_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16245..17507)
DNA (1263bp) protein (421aa)
Efflux transporter RND family MFP subunit n=1 Tax=Alistipes sp. CAG:29 RepID=R6YD05_9BACT
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD26486.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
RND family efflux transporter MFP subunit
L2_022_000M1_scaffold_30_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17526..19004)
DNA (1479bp) protein (493aa)
Outer membrane efflux protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXZ1_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:CDD26485.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane efflux protein
L2_022_000M1_scaffold_30_14
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19211..20569
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037C096E
Uncharacterized protein {ECO:0000313|EMBL:CDC97423.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
two-component system response regulator
L2_022_000M1_scaffold_30_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20566..21870
DNA (1305bp) protein (435aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036969D3
two-component system sensor histidine kinase
L2_022_000M1_scaffold_30_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21996..22406)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YCZ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26481.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_022_000M1_scaffold_30_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22455..23123)
DNA (669bp) protein (223aa)
DNA repair protein RecO n=1 Tax=Alistipes onderdonkii RepID=UPI00037EA5B0
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
recombinational DNA repair protein (RecF pathway)
L2_022_000M1_scaffold_30_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23184..24011)
DNA (828bp) protein (276aa)
ribosomal protein L11 methyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI00037F5997
Ribosomal protein L11 methylase {ECO:0000313|EMBL:CDD26479.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
50S ribosomal protein L11 methylase
L2_022_000M1_scaffold_30_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24082..24978
DNA (897bp) protein (299aa)
integrase n=1 Tax=Alistipes onderdonkii RepID=UPI0003780F48
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
tyrosine recombinase XerD
L2_022_000M1_scaffold_30_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25142..26488)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000361C26F
Ig-like domain-containing surface protein
Ig-like domain-containing surface protein {ECO:0000313|EMBL:AFL77737.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_30_21
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26505..27815)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003679F43
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77738.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_30_22
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27844..29634)
DNA (1791bp) protein (597aa)
carbohydrate-binding protein SusD n=1 Tax=Alistipes onderdonkii RepID=UPI00036BF648
SusD family protein {ECO:0000313|EMBL:CCZ75633.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
RagB/SusD family protein
L2_022_000M1_scaffold_30_23
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29654..33211)
DNA (3558bp) protein (1186aa)
TonB-linked outer membrane protein n=1 Tax=Alistipes onderdonkii RepID=UPI000372B652
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFR56245.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
SusC/RagA family TonB-linked outer membrane protein
L2_022_000M1_scaffold_30_24
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33341..34336)
DNA (996bp) protein (332aa)
sigma factor n=1 Tax=Alistipes onderdonkii RepID=UPI00035E1B2B
Fe2+-dicitrate sensor membrane protein
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:AFL77741.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_30_25
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34407..35000)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003797308
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor Bacteroides expansion family 1 {ECO:0000313|EMBL:CCZ75638.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_022_000M1_scaffold_30_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35237..37045
DNA (1809bp) protein (603aa)
beta-galactosidase n=1 Tax=Alistipes onderdonkii RepID=UPI00036A815F
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CDD26477.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
beta-galactosidase/beta-glucuronidase
L2_022_000M1_scaffold_30_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37246..38271)
DNA (1026bp) protein (342aa)
alpha/beta hydrolase n=1 Tax=Alistipes onderdonkii RepID=UPI00037BA608
Uncharacterized protein {ECO:0000313|EMBL:EDN86015.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alpha/beta hydrolase
L2_022_000M1_scaffold_30_28
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38280..39464)
DNA (1185bp) protein (395aa)
Tat pathway signal sequence domain protein n=5 Tax=root RepID=B3JIM7_9BACE
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEZ21183.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
aldo/keto reductase
L2_022_000M1_scaffold_30_29
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

39711..39884
DNA (174bp) protein (58aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCX0_9BACT
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EDY84364.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
maltose O-acetyltransferase
L2_022_000M1_scaffold_30_30
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39926..40822
DNA (897bp) protein (299aa)
transcriptional regulator n=1 Tax=Alistipes onderdonkii RepID=UPI00035D143B
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDV01165.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
AraC family transcriptional regulator
Displaying items 1-30 of 145 in total

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