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L2_022_000M1_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_57_1
unknown

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1..69
DNA (69bp) protein (23aa)

This feature has no annotations

L2_022_000M1_scaffold_57_2
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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199..621
DNA (423bp) protein (141aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
Putative Holliday junction resolvase n=2 Tax=Bacteroides RepID=E2NK20_9BACE
Holliday junction resolvase YqgF
L2_022_000M1_scaffold_57_3
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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681..1235
DNA (555bp) protein (185aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6KAV0_9BACE
L2_022_000M1_scaffold_57_4
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1352..3388
DNA (2037bp) protein (679aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9F6B8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY28609.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
L2_022_000M1_scaffold_57_5
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3468..5408
DNA (1941bp) protein (647aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=3 Tax=Bacteroides cellulosilyticus RepID=I8VQC4_9BACE
L2_022_000M1_scaffold_57_6
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5486..6127
DNA (642bp) protein (214aa)
Translation initiation factor IF-3 n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9QGL1_9BACE
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
bacterial translation initiation factor 3 (bIF-3)
L2_022_000M1_scaffold_57_7
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6197..6394
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=5 Tax=Bacteroides RepID=B3CFR7_9BACE
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
LSU ribosomal protein L35P
L2_022_000M1_scaffold_57_8
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6491..6841
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=6 Tax=Bacteroides RepID=B3CFR6_9BACE
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
50S ribosomal protein L20
L2_022_000M1_scaffold_57_9
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7339..8646)
DNA (1308bp) protein (436aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
paaK2; putative phenylacetate-coenzyme A ligase (EC:6.2.1.30)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NKM8_9BACE
L2_022_000M1_scaffold_57_10
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8669..9250)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6L8T8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB70707.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
putative indolepyruvate oxidoreductase subunit
L2_022_000M1_scaffold_57_11
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9255..10847)
DNA (1593bp) protein (531aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=3 Tax=Bacteroides RepID=I8VT83_9BACE
putative indolepyruvate oxidoreductase/indolepyruvate ferredoxin oxidoreductase
L2_022_000M1_scaffold_57_12
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10946..11983)
DNA (1038bp) protein (346aa)
YceG family protein n=3 Tax=Bacteroides RepID=E2NKV0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB70705.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
hypothetical protein
L2_022_000M1_scaffold_57_13
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12242..12433)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2F199_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA18710.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L2_022_000M1_scaffold_57_14
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12441..13232)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6YEM3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD32325.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
L2_022_000M1_scaffold_57_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13237..14715)
DNA (1479bp) protein (493aa)
Type I restriction enzyme HsdR protein N-terminal domain protein n=2 Tax=Bacteroides RepID=A7V4Z9_BACUN
Type I restriction enzyme HsdR protein N-terminal domain protein {ECO:0000313|EMBL:EDO53380.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L2_022_000M1_scaffold_57_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14754..15455)
DNA (702bp) protein (234aa)
Peptidase S24-like protein n=2 Tax=Bacteroides RepID=A7V4Z8_BACUN
Peptidase S24-like protein {ECO:0000313|EMBL:EDO53379.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L2_022_000M1_scaffold_57_17
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15630..15962
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Bacteroides finegoldii RepID=K5DFX1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ91823.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
hypothetical protein
L2_022_000M1_scaffold_57_18
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15964..16173
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EHE3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE02304.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L2_022_000M1_scaffold_57_19
unknown

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comp(16268..16429)
DNA (162bp) protein (54aa)

This feature has no annotations

L2_022_000M1_scaffold_57_20
unknown

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16673..16870
DNA (198bp) protein (66aa)

This feature has no annotations

L2_022_000M1_scaffold_57_21
unknown

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comp(17071..17208)
DNA (138bp) protein (46aa)

This feature has no annotations

L2_022_000M1_scaffold_57_22
unknown

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17239..17463
DNA (225bp) protein (75aa)

This feature has no annotations

L2_022_000M1_scaffold_57_23
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17841..18068
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CL09T03C10 RepID=K5DFW7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ91818.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
L2_022_000M1_scaffold_57_24
unknown

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18092..18553
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HIH1_9BACE
L2_022_000M1_scaffold_57_25
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18550..19695
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HIM2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KFF11212.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
L2_022_000M1_scaffold_57_26
unknown

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19736..20059
DNA (324bp) protein (108aa)

This feature has no annotations

L2_022_000M1_scaffold_57_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20083..20907
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0IXR1_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDO10440.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L2_022_000M1_scaffold_57_28
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21166..21459
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X5A4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN88017.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
L2_022_000M1_scaffold_57_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21456..22433
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0J7Z9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN00223.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L2_022_000M1_scaffold_57_30
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22372..22929
DNA (558bp) protein (186aa)
Conserved domain protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PDU6_9BACE
Conserved domain protein {ECO:0000313|EMBL:EGF54925.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
hypothetical protein
Displaying items 1-30 of 143 in total

View Taxonomy