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L2_022_000M1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_106_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..1219
DNA (1218bp) protein (406aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=3 Tax=Alistipes RepID=I3YI43_ALIFI
beta-ketoacyl-acyl-carrier-protein synthase II
L2_022_000M1_scaffold_106_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1240..2013
DNA (774bp) protein (258aa)
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Ribonuclease 3 n=3 Tax=Alistipes RepID=I3YI42_ALIFI
L2_022_000M1_scaffold_106_3
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2128..2742
DNA (615bp) protein (205aa)
DNA repair protein radc n=2 Tax=Alistipes RepID=I3YI41_ALIFI
DNA repair protein radc
DNA repair protein radc {ECO:0000313|EMBL:AFL76659.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_106_4
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


3165..4709
DNA (1545bp) protein (515aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Glycine--tRNA ligase n=3 Tax=Alistipes RepID=I3YI39_ALIFI
L2_022_000M1_scaffold_106_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4720..5133
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Putative Holliday junction resolvase n=3 Tax=Alistipes RepID=I3YI38_ALIFI
RNAse H-fold protein YqgF
L2_022_000M1_scaffold_106_6
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5130..5675
DNA (546bp) protein (182aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Peptide deformylase n=3 Tax=Alistipes RepID=I3YI37_ALIFI
peptide deformylase
L2_022_000M1_scaffold_106_7
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5760..6344)
DNA (585bp) protein (195aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YI35_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76910.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_022_000M1_scaffold_106_8
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6391..6900)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V0L3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76911.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_022_000M1_scaffold_106_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6960..7427)
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MEJ0_9BACT
Conserved domain protein {ECO:0000313|EMBL:CCZ76912.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_022_000M1_scaffold_106_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7617..10346)
DNA (2730bp) protein (910aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:AFL76651.1}; EC=2.7.9.1 {ECO:0000313|EMBL:AFL76651.1};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Pyruvate phosphate dikinase n=2 Tax=Alistipes RepID=I3YI33_ALIFI
L2_022_000M1_scaffold_106_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10519..11469)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MEJ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56640.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_022_000M1_scaffold_106_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11480..11632)
DNA (153bp) protein (51aa)
Helix-turn-helix protein n=2 Tax=Alistipes RepID=I3YI31_ALIFI
Helix-turn-helix protein
Helix-turn-helix protein {ECO:0000313|EMBL:AFL76649.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_106_13
unknown

Not on your lists

comp(11882..11974)
DNA (93bp) protein (31aa)
hypothetical protein
L2_022_000M1_scaffold_106_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12074..13390)
DNA (1317bp) protein (439aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Alistipes sp. HGB5 RepID=E4MEJ6_9BACT
L2_022_000M1_scaffold_106_15
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13406..14056)
DNA (651bp) protein (217aa)
Ribosome maturation factor RimM n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UVW4_9BACT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_022_000M1_scaffold_106_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14269..14823)
DNA (555bp) protein (185aa)
30S ribosomal protein S16 n=3 Tax=Alistipes RepID=I3YI27_ALIFI
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_022_000M1_scaffold_106_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15351..15734)
DNA (384bp) protein (128aa)
Response regulator receiver domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MEJ9_9BACT
Response regulator receiver domain protein {ECO:0000313|EMBL:EFR56558.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
CheY-like receiver domain-containing protein
L2_022_000M1_scaffold_106_18
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15791..17518)
DNA (1728bp) protein (576aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UAK0_9BACT
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:CCZ75258.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
metalloendopeptidase-like membrane protein
L2_022_000M1_scaffold_106_19
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17503..18021)
DNA (519bp) protein (173aa)
Regulatory protein RecX n=2 Tax=Alistipes RepID=I3YHW6_ALIFI
hypothetical protein
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_106_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18003..18845)
DNA (843bp) protein (281aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=2 Tax=Alistipes RepID=I3YHW5_ALIFI
protein-(glutamine-N5) methyltransferase
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:AFL76583.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_106_21
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18845..19819)
DNA (975bp) protein (325aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Chorismate synthase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHW4_ALIFI
L2_022_000M1_scaffold_106_22
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19824..21068)
DNA (1245bp) protein (415aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHW3_ALIFI
L2_022_000M1_scaffold_106_23
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21140..21928)
DNA (789bp) protein (263aa)
ABC-type (Unclassified) transport system, ATPase component n=3 Tax=Alistipes RepID=I3YHW2_ALIFI
ABC transporter ATPase
ABC-type (Unclassified) transport system, ATPase component {ECO:0000313|EMBL:AFL76580.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_106_24
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22229..23461)
DNA (1233bp) protein (411aa)
Phosphate-selective porin O and P n=2 Tax=Alistipes RepID=I3YHW1_ALIFI
Phosphate-selective porin O and P
Phosphate-selective porin O and P {ECO:0000313|EMBL:AFL76579.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_022_000M1_scaffold_106_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23731..25923
DNA (2193bp) protein (731aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EFR56610.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFR56610.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
ATP-dependent DNA helicase RecQ n=1 Tax=Alistipes sp. HGB5 RepID=E4MEK7_9BACT
ATP-dependent DNA helicase RecQ
L2_022_000M1_scaffold_106_26
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26000..26218
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YHV9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75393.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_022_000M1_scaffold_106_27
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26456..26647
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YHV8_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75394.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_022_000M1_scaffold_106_28
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27008..27211
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MEL0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ75395.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
acetyltransferase
L2_022_000M1_scaffold_106_29
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


27213..28364
DNA (1152bp) protein (384aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Alistipes RepID=I3YHV7_ALIFI
dimethyladenosine transferase
L2_022_000M1_scaffold_106_30
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28603..29907)
DNA (1305bp) protein (435aa)
Putative Zn-dependent peptidase n=2 Tax=Alistipes RepID=I3YHV6_ALIFI
Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:CCZ75397.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Displaying items 1-30 of 96 in total

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