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L2_022_000M1_scaffold_197

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_197_1
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..626
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AEB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83995.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
transposase IS4
L2_022_000M1_scaffold_197_2
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

884..1501
DNA (618bp) protein (206aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EKN0_9FIRM
L2_022_000M1_scaffold_197_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1557..2183)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XE72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04642.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_022_000M1_scaffold_197_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2243..2911)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WKJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04636.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
L2_022_000M1_scaffold_197_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2967..3725)
DNA (759bp) protein (253aa)
Amino acid/amide ABC transporter ATP-binding protein 1 HAAT family (TC 3.A.1.4.-) n=2 Tax=root RepID=R6W590_9CLOT
Amino acid/amide ABC transporter ATP-binding protein 1 HAAT family (TC 3.A.1.4.-) {ECO:0000313|EMBL:CDD04635.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-)
L2_022_000M1_scaffold_197_6
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3728..4804)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XE63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04632.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
inner-membrane translocator
L2_022_000M1_scaffold_197_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4826..5725)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W583_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04625.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
inner-membrane translocator
L2_022_000M1_scaffold_197_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5874..7073)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XE51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04617.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L2_022_000M1_scaffold_197_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

7359..7568
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EKL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00440.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_022_000M1_scaffold_197_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7565..7918)
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0L8_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_022_000M1_scaffold_197_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7926..8486)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XE23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04582.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
conserved hypothetical protein TIGR00488
L2_022_000M1_scaffold_197_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8512..9126)
DNA (615bp) protein (205aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase NadD (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W545_9CLOT
L2_022_000M1_scaffold_197_13
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(9191..9481)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6ETI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00434.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_022_000M1_scaffold_197_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9506..10798)
DNA (1293bp) protein (431aa)
GTPase Obg n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0K5_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Obg family GTPase CgtA
L2_022_000M1_scaffold_197_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10884..11168)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=2 Tax=Firmicutes RepID=R6EUH4_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
LSU ribosomal protein L27P
L2_022_000M1_scaffold_197_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11172..11519)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WKD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04561.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_197_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(11525..11830)
DNA (306bp) protein (102aa)
50S ribosomal protein L21 n=3 Tax=root RepID=R6ETH8_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
LSU ribosomal protein L21P
L2_022_000M1_scaffold_197_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11991..12719)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XDZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04552.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_022_000M1_scaffold_197_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12746..13633)
DNA (888bp) protein (296aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase alpha chain n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCL2_9CLOT
L-serine dehydratase alpha chain {ECO:0000313|EMBL:CDD04549.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_197_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13636..14298)
DNA (663bp) protein (221aa)
sdhB; L-serine dehydratase iron-sulfur-dependent beta subunit SdhB (EC:4.3.1.17)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0I3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04543.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_197_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14337..15251)
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0I0_9CLOT
L2_022_000M1_scaffold_197_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15251..15757)
DNA (507bp) protein (169aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
lspA; signal peptidase II LspA (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W502_9CLOT
L2_022_000M1_scaffold_197_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15783..16892)
DNA (1110bp) protein (370aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Clostridium sp. CAG:91 RepID=R6XDX9_9CLOT
L2_022_000M1_scaffold_197_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17019..17555)
DNA (537bp) protein (179aa)
Cell division protein SepF n=1 Tax=Clostridium sp. CAG:91 RepID=R6W4Z8_9CLOT
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
cell division protein sepF
L2_022_000M1_scaffold_197_25
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17589..18311)
DNA (723bp) protein (241aa)
Pyridoxal phosphate enzyme YggS family n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0G1_9CLOT
Pyridoxal phosphate enzyme YggS family {ECO:0000313|EMBL:CDD04513.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
pyridoxal phosphate enzyme, YggS family
L2_022_000M1_scaffold_197_26
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18329..19897)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WK85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04506.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_022_000M1_scaffold_197_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19987..20406)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0F2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04503.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_022_000M1_scaffold_197_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20495..21445)
DNA (951bp) protein (317aa)
dacA2; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=2 Tax=root RepID=R6W4X0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04500.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_197_29
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21468..21872)
DNA (405bp) protein (135aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Clostridium sp. CAG:91 RepID=R6WK69_9CLOT
L2_022_000M1_scaffold_197_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21907..23013)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04489.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
rodA1; rod shape-determining protein RodA1
Displaying items 1-30 of 68 in total

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