ggKbase home page

L2_022_000M1_scaffold_208

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_208_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..451
DNA (450bp) protein (150aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:CBL11495.1}; EC=2.7.9.1 {ECO:0000313|EMBL:CBL11495.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Pyruvate, phosphate dikinase n=2 Tax=Roseburia intestinalis RepID=D4KQ46_9FIRM
L2_022_000M1_scaffold_208_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

699..1337
DNA (639bp) protein (213aa)
Transcriptional regulator n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVV6_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL11496.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_208_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1359..1763
DNA (405bp) protein (135aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6BD62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57011.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_022_000M1_scaffold_208_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1741..2562
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQ49_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09001.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_208_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2669..3952
DNA (1284bp) protein (428aa)
Erythromycin esterase homolog n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQ50_9FIRM
Erythromycin esterase homolog
Erythromycin esterase homolog {ECO:0000313|EMBL:CBL09002.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_208_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3994..4359
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KQ51_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11500.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_208_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4509..5708
DNA (1200bp) protein (400aa)
Exonuclease SbcD n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B1F8_9FIRM
Exonuclease SbcD {ECO:0000313|EMBL:CDA57015.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
exonuclease SbcD
L2_022_000M1_scaffold_208_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5819..9721
DNA (3903bp) protein (1301aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL11502.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
hypothetical protein
L2_022_000M1_scaffold_208_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9898..11271
DNA (1374bp) protein (458aa)
pyridoxal-phosphate dependent TrpB-like enzyme (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CBL11503.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Tryptophan synthase beta chain n=4 Tax=Roseburia RepID=D4KQ55_9FIRM
L2_022_000M1_scaffold_208_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11642..12142
DNA (501bp) protein (167aa)
Transcriptional regulators n=3 Tax=Roseburia RepID=D4KQ56_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CDA57019.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_208_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12123..13964
DNA (1842bp) protein (614aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B1G6_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDA57020.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type multidrug transport system, ATPase and permease components
L2_022_000M1_scaffold_208_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13964..15637
DNA (1674bp) protein (558aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BD72_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDA57021.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type multidrug transport system, ATPase and permease components
L2_022_000M1_scaffold_208_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15914..16351
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family n=4 Tax=Roseburia RepID=D4KQ60_9FIRM
transcriptional regulator, MarR family
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDA57022.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_208_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16353..17117
DNA (765bp) protein (255aa)
Predicted permeases n=4 Tax=Roseburia RepID=D4KQ61_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBL11508.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_208_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17632..18768
DNA (1137bp) protein (379aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=3 Tax=Roseburia intestinalis RepID=D4KQ64_9FIRM
TRAP-type C4-dicarboxylate transport system, periplasmic component
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:CBL09016.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_208_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18861..19382
DNA (522bp) protein (174aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=3 Tax=Roseburia intestinalis RepID=D4KQ65_9FIRM
TRAP-type C4-dicarboxylate transport system, small permease component
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:CBL11510.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_208_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19382..20686
DNA (1305bp) protein (435aa)
TRAP transporter, DctM subunit n=4 Tax=Roseburia RepID=D4KQ66_9FIRM
TRAP transporter, DctM subunit
TRAP transporter DctM subunit {ECO:0000313|EMBL:CDA57027.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_208_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20712..21185
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6AYY3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09019.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_208_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21154..22764
DNA (1611bp) protein (537aa)
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA02_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEV01351.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_208_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22736..23563
DNA (828bp) protein (276aa)
Two component transcriptional regulator AraC family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B1I4_9FIRM
Two component transcriptional regulator AraC family {ECO:0000313|EMBL:CDA57030.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
two component transcriptional regulator, AraC family
L2_022_000M1_scaffold_208_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23564..24571
DNA (1008bp) protein (336aa)
TRAP transporter solute receptor, DctP family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA04_9FIRM
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EEV01353.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L2_022_000M1_scaffold_208_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24582..25751
DNA (1170bp) protein (390aa)
Fucose permease n=3 Tax=Roseburia RepID=D4KQ72_9FIRM
Fucose permease
Fucose permease {ECO:0000313|EMBL:CBL09024.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_208_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25774..26127
DNA (354bp) protein (118aa)
Cupin domain n=3 Tax=Roseburia RepID=D4KVX7_9FIRM
Cupin domain.
Cupin domain protein {ECO:0000313|EMBL:EEV01355.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_208_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26124..26318
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVX8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11518.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_208_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26507..28210
DNA (1704bp) protein (568aa)
prolyl-tRNA synthetase, family II (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Proline--tRNA ligase n=2 Tax=Roseburia RepID=D4KVX9_9FIRM
L2_022_000M1_scaffold_208_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28384..28941
DNA (558bp) protein (186aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=3 Tax=Roseburia RepID=D4KVY0_9FIRM
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Divergent AAA domain protein {ECO:0000313|EMBL:EEV01315.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_208_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29182..29649
DNA (468bp) protein (156aa)
ATP-dependent DNA helicase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BV03_9FIRM
ATP-dependent DNA helicase {ECO:0000313|EMBL:CDA57037.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_022_000M1_scaffold_208_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29864..30088
DNA (225bp) protein (75aa)
Uncharacterized protein n=5 Tax=Roseburia RepID=C7GA24_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57039.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_208_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30096..30290
DNA (195bp) protein (65aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GA25_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09029.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_208_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30421..31050
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GA26_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57041.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying items 1-30 of 62 in total

View Taxonomy