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L2_022_000M1_scaffold_224

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_224_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..669
DNA (669bp) protein (223aa)
AraC-type DNA-binding domain-containing proteins n=2 Tax=Roseburia RepID=D4KKE6_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL10826.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_224_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(672..956)
DNA (285bp) protein (95aa)
Acylphosphatases (EC:3.6.1.7)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553, ECO:0000313|EMBL:CBL10962.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Acylphosphatase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUC2_9FIRM
L2_022_000M1_scaffold_224_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(970..1143)
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7GFC4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10961.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_224_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1143..1451)
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GFC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99483.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_224_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1409..2089)
DNA (681bp) protein (227aa)
Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKE3_9FIRM
exonuclease, DNA polymerase III, epsilon subunit family
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:CBL10823.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_224_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2135..2668)
DNA (534bp) protein (178aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Fructose-2,6-bisphosphatase n=4 Tax=Roseburia RepID=D4KUB9_9FIRM
Fructose-2 6-bisphosphatase {ECO:0000313|EMBL:CDA57241.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_224_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2725..2994)
DNA (270bp) protein (90aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7GFC8_9FIRM
Protein of unknown function (FYDLN_acid).
Uncharacterized protein {ECO:0000313|EMBL:CBL10821.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_224_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3188..4141)
DNA (954bp) protein (318aa)
Putative transposase, YhgA-like n=2 Tax=Roseburia RepID=D4KKE0_9FIRM
Putative transposase, YhgA-like.
Putative transposase, YhgA-like {ECO:0000313|EMBL:CBL10820.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_224_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4395..6023)
DNA (1629bp) protein (543aa)
Flagellin and related hook-associated proteins n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B268_9FIRM
Flagellin and related hook-associated proteins {ECO:0000313|EMBL:CDA57245.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Flagellin and related hook-associated proteins
L2_022_000M1_scaffold_224_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6186..6446)
DNA (261bp) protein (87aa)
Global regulator protein family n=3 Tax=Roseburia RepID=D4KKD7_9FIRM
Global regulator protein family.
Global regulator protein family {ECO:0000313|EMBL:CDA57246.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_224_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6552..7130
DNA (579bp) protein (193aa)
Site-specific recombinase XerD n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BVI6_9FIRM
Site-specific recombinase XerD {ECO:0000313|EMBL:CDA57247.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Site-specific recombinase XerD
L2_022_000M1_scaffold_224_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7353..8123
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AZB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57248.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_022_000M1_scaffold_224_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8320..8670)
DNA (351bp) protein (117aa)
Nucleoid-associated protein ROI_41000 n=4 Tax=Roseburia RepID=D4KKD4_9FIRM
conserved hypothetical protein TIGR00103
Nucleoid-associated protein BN484_00730 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_224_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8788..10392)
DNA (1605bp) protein (535aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EEU99493.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEU99493.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFD5_9FIRM
L2_022_000M1_scaffold_224_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10370..11443)
DNA (1074bp) protein (358aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase {ECO:0000313|EMBL:CBL10949.1}; EC=2.7.1.11 {ECO:0000313|EMBL:CBL10949.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
6-phosphofructokinase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUA9_9FIRM
L2_022_000M1_scaffold_224_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11975..13417
DNA (1443bp) protein (481aa)
Transporter, UIT6 family (TC 9.B.53) n=2 Tax=Roseburia RepID=D4KKD0_9FIRM
transporter, UIT6 family (TC 9.B.53)
Transporter, UIT6 family (TC 9.B.53) {ECO:0000313|EMBL:CBL10810.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_224_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13433..14431
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6AZB9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57253.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_224_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14696..16081)
DNA (1386bp) protein (462aa)
MATE efflux family protein n=2 Tax=Roseburia intestinalis RepID=C7GFE5_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL10808.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_224_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16296..17279)
DNA (984bp) protein (328aa)
phosphotransacetylase (EC:2.3.1.8)
Phosphate acetyltransferase {ECO:0000313|EMBL:EEU99504.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EEU99504.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Phosphotransacetylase n=2 Tax=Roseburia intestinalis RepID=D4KKC7_9FIRM
L2_022_000M1_scaffold_224_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17570..18028)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BDT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57256.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_022_000M1_scaffold_224_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18389..18853)
DNA (465bp) protein (155aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Cytosine/adenosine deaminases n=3 Tax=Roseburia RepID=D4KU99_9FIRM
Cytosine/adenosine deaminases
L2_022_000M1_scaffold_224_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18942..19520
DNA (579bp) protein (193aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.128)
Acetyltransferases, including N-acetylases of ribosomal proteins {ECO:0000313|EMBL:CBL10804.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CBL10804.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Acetyltransferases, including N-acetylases of ribosomal proteins n=3 Tax=Roseburia intestinalis RepID=D4KU98_9FIRM
L2_022_000M1_scaffold_224_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19577..20578)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKC3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10803.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_022_000M1_scaffold_224_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20706..22304)
DNA (1599bp) protein (533aa)
Sensory box/GGDEF family protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B286_9FIRM
Sensory box/GGDEF family protein {ECO:0000313|EMBL:CDA57260.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
two-component system PleD-like family response regulator
L2_022_000M1_scaffold_224_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22480..22872
DNA (393bp) protein (131aa)
Fe2+/Zn2+ uptake regulation proteins n=4 Tax=Roseburia RepID=D4KKC2_9FIRM
Fe2+/Zn2+ uptake regulation proteins
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CBL10936.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_224_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23056..23598
DNA (543bp) protein (181aa)
Rubrerythrin n=4 Tax=Roseburia RepID=D4KKC1_9FIRM
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CDA57262.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_022_000M1_scaffold_224_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23687..24109)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU94_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10934.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_022_000M1_scaffold_224_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24519..27101)
DNA (2583bp) protein (861aa)
Sensor histidine kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B8J3_9FIRM
Sensor histidine kinase {ECO:0000313|EMBL:CDA57264.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_022_000M1_scaffold_224_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27098..27790)
DNA (693bp) protein (231aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=3 Tax=Roseburia RepID=D4KU93_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator receiver domain protein {ECO:0000313|EMBL:EEV01042.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_022_000M1_scaffold_224_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28036..29385
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAM5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEV01043.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
putative efflux protein, MATE family
Displaying items 1-30 of 59 in total

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