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L2_022_000M1_scaffold_257

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_257_1
unknown

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comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

L2_022_000M1_scaffold_257_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(135..746)
DNA (612bp) protein (204aa)
Translation initiation factor IF-3 n=6 Tax=Bacteroides RepID=C3QP53_9BACE
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
bacterial translation initiation factor 3 (bIF-3)
L2_022_000M1_scaffold_257_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(819..2759)
DNA (1941bp) protein (647aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=8 Tax=Bacteroides RepID=A7LVC7_BACOV
L2_022_000M1_scaffold_257_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2842..4872)
DNA (2031bp) protein (677aa)
TPR domain protein n=3 Tax=Bacteroides RepID=D7K9J9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY65998.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Tetratricopeptide repeat.
L2_022_000M1_scaffold_257_5
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4949..5503)
DNA (555bp) protein (185aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=6 Tax=Bacteroides RepID=A7LVC5_BACOV
L2_022_000M1_scaffold_257_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5549..5965)
DNA (417bp) protein (139aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Putative Holliday junction resolvase n=7 Tax=Bacteroides RepID=C3QP57_9BACE
conserved hypothetical protein TIGR00250
L2_022_000M1_scaffold_257_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6040..7179)
DNA (1140bp) protein (380aa)
OmpA family protein n=5 Tax=Bacteroides RepID=D4WKY3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY58672.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Outer membrane protein and related peptidoglycan-associated (lipo)proteins
L2_022_000M1_scaffold_257_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7499..8467)
DNA (969bp) protein (323aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QP59_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM98359.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L2_022_000M1_scaffold_257_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8493..9599)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=D7K9J4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM98360.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L2_022_000M1_scaffold_257_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9682..11142)
DNA (1461bp) protein (487aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00055979};; ATP-sulfurylase large subunit {ECO:0000256|HAMAP-Rule:MF_00062}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00062}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 n=8 Tax=Bacteroides RepID=C3QP61_9BACE
L2_022_000M1_scaffold_257_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11155..12063)
DNA (909bp) protein (303aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 n=10 Tax=Bacteroides RepID=A7LVB9_BACOV
L2_022_000M1_scaffold_257_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12071..12679)
DNA (609bp) protein (203aa)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase n=9 Tax=Bacteroides RepID=A7LVB8_BACOV
L2_022_000M1_scaffold_257_13
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12692..14245)
DNA (1554bp) protein (518aa)
Putative ATP synthase F0, A subunit n=3 Tax=Bacteroides RepID=C3QP64_9BACE
Putative Na+/sulfate symporter {ECO:0000313|EMBL:EFI36711.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Di-and tricarboxylate transporters
L2_022_000M1_scaffold_257_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14257..15081)
DNA (825bp) protein (275aa)
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:KDS14452.1}; EC=3.1.3.7 {ECO:0000313|EMBL:KDS14452.1};; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7)
3'(2'),5'-bisphosphate nucleotidase n=2 Tax=Bacteroides RepID=C3QP65_9BACE
L2_022_000M1_scaffold_257_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15333..15827)
DNA (495bp) protein (165aa)
Sporulation and cell division repeat protein n=9 Tax=Bacteroides RepID=C3QP67_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY66009.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Cell division protein
L2_022_000M1_scaffold_257_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15944..16714)
DNA (771bp) protein (257aa)
Serine 3-dehydrogenase n=7 Tax=Bacteroides RepID=C3QP68_9BACE
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFF50794.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Short-chain alcohol dehydrogenase of unknown specificity
L2_022_000M1_scaffold_257_17
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16915..17124
DNA (210bp) protein (70aa)
Uncharacterized protein n=17 Tax=Bacteroides RepID=A7LVB2_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEO49501.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L2_022_000M1_scaffold_257_18
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17157..17519
DNA (363bp) protein (121aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=A7LVB1_BACOV
Protein of unknown function (DUF1469).
Uncharacterized protein {ECO:0000313|EMBL:CDB57120.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L2_022_000M1_scaffold_257_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17523..17780
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9TAY9_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY66013.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L2_022_000M1_scaffold_257_20
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17801..18181)
DNA (381bp) protein (127aa)
Uncharacterized conserved protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CX32_9BACE
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK66734.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L2_022_000M1_scaffold_257_21
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18174..18467)
DNA (294bp) protein (98aa)
Nucleotidyltransferase domain protein n=5 Tax=Bacteroides RepID=C3QP73_9BACE
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EFI36703.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L2_022_000M1_scaffold_257_22
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18795..19367)
DNA (573bp) protein (191aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Bacteroides sp. D2 RepID=E5C804_9BACE
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EFS29852.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
dTDP-4-dehydrorhamnose 3,5-epimerase
L2_022_000M1_scaffold_257_23
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19373..20491)
DNA (1119bp) protein (373aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bacteroides sp. D2 RepID=E5C805_9BACE
dTDP-glucose 4,6-dehydratase
L2_022_000M1_scaffold_257_24
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20488..21390)
DNA (903bp) protein (301aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Bacteroides sp. D2 RepID=E5C806_9BACE
glucose-1-phosphate thymidylyltransferase
L2_022_000M1_scaffold_257_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21404..22120)
DNA (717bp) protein (239aa)
WecB/TagA/CpsF family glycosyl transferase n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9TAI4_BACOV
WecB/TagA/CpsF family glycosyl transferase {ECO:0000313|EMBL:EIY66086.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
glycosyl transferase family protein
L2_022_000M1_scaffold_257_26
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22210..23445)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C809_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS29856.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
putative glycosyltransferase protein
L2_022_000M1_scaffold_257_27
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23607..24425)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=I0PYB3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC71908.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
putative membrane protein
L2_022_000M1_scaffold_257_28
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24434..25393)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C810_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS29857.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
putative acyltransferase transmembrane protein
L2_022_000M1_scaffold_257_29
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25405..26319)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C811_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS29858.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
L2_022_000M1_scaffold_257_30
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26328..27425)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C812_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS29859.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Glycosyltransferases involved in cell wall biogenesis
Displaying items 1-30 of 57 in total

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