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L2_022_000M1_scaffold_271

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_000M1_scaffold_271_1
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(96..1193)
DNA (1098bp) protein (366aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VNT1_9CLOT
L2_022_000M1_scaffold_271_2
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1532..2629
DNA (1098bp) protein (366aa)
vanY; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase VanY n=1 Tax=Clostridium sp. CAG:91 RepID=R6VTC2_9CLOT
D-alanyl-D-alanine carboxypeptidase VanY {ECO:0000313|EMBL:CDD00270.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_022_000M1_scaffold_271_3
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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2613..3746
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EBQ1_9FIRM
L2_022_000M1_scaffold_271_4
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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3869..4204
DNA (336bp) protein (112aa)
Preprotein translocase subunit n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6E9T0_9FIRM
Preprotein translocase subunit {ECO:0000313|EMBL:CDA97323.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
preprotein translocase, YajC subunit
L2_022_000M1_scaffold_271_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

4412..5494
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EBQ7_9FIRM
L2_022_000M1_scaffold_271_6
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5515..7224
DNA (1710bp) protein (570aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Clostridium sp. CAG:510 RepID=R6C258_9CLOT
L2_022_000M1_scaffold_271_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7256..8935
DNA (1680bp) protein (560aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ilvB2; acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W149_9CLOT
L2_022_000M1_scaffold_271_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8935..10344
DNA (1410bp) protein (470aa)
Uncharacterized protein n=2 Tax=root RepID=R6WFZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03086.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L,D-transpeptidase catalytic domain protein
L2_022_000M1_scaffold_271_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

10494..11576
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
3-phosphoserine/phosphohydroxythreonine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=3 Tax=root RepID=R6EKX0_9FIRM
L2_022_000M1_scaffold_271_10
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

11588..12751
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EBT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97350.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
L2_022_000M1_scaffold_271_11
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

12983..13756
DNA (774bp) protein (258aa)
PHP domain protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6E9W1_9FIRM
PHP domain protein {ECO:0000313|EMBL:CDA97348.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Predicted metal-dependent phosphoesterases (PHP family)
L2_022_000M1_scaffold_271_12
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

13941..16241
DNA (2301bp) protein (767aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EKW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97346.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter substrate-binding protein
L2_022_000M1_scaffold_271_13
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

16261..17172
DNA (912bp) protein (304aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EBT2_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDA97345.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter permease
L2_022_000M1_scaffold_271_14
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

17172..18122
DNA (951bp) protein (317aa)
ABC transporter permease protein n=2 Tax=root RepID=R6EJ49_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDA97344.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter permease
L2_022_000M1_scaffold_271_15
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

18205..19923
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6E9V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97343.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
RND family transporter
L2_022_000M1_scaffold_271_16
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

19975..21255
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F5S1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97342.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter permease
L2_022_000M1_scaffold_271_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

21290..23794
DNA (2505bp) protein (835aa)
ABC transporter substrate-binding protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EKW0_9FIRM
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDA97341.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter substrate-binding protein
L2_022_000M1_scaffold_271_18
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(23877..24494)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EBS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97340.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_022_000M1_scaffold_271_19
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

24556..25212
DNA (657bp) protein (219aa)
thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine pyrophosphokinase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6E9U8_9FIRM
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CDA97338.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_022_000M1_scaffold_271_20
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

25228..25425
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F5R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97337.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_022_000M1_scaffold_271_21
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

25412..26128
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=root RepID=R6EKV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97336.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
two component transcriptional regulator
L2_022_000M1_scaffold_271_22
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

26190..28691
DNA (2502bp) protein (834aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EBR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97335.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
integral membrane sensor signal transduction histidine kinase
L2_022_000M1_scaffold_271_23
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

28914..30173
DNA (1260bp) protein (420aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EJ40_9FIRM
3-isopropylmalate dehydratase, large subunit
L2_022_000M1_scaffold_271_24
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

30308..30799
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6E9U3_9FIRM
L2_022_000M1_scaffold_271_25
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31224..32393)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WC21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01721.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
cation diffusion facilitator family transporter
L2_022_000M1_scaffold_271_26
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

32661..34217
DNA (1557bp) protein (519aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=root RepID=R6ET79_9FIRM
L2_022_000M1_scaffold_271_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34262..35392
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VSU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01723.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
aldo/keto reductase
L2_022_000M1_scaffold_271_28
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

35423..36799
DNA (1377bp) protein (459aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
enolase (EC:4.2.1.11)
Enolase n=2 Tax=root RepID=R6EU80_9FIRM
L2_022_000M1_scaffold_271_29
unknown

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36839..36946
DNA (108bp) protein (36aa)

This feature has no annotations

L2_022_000M1_scaffold_271_30
unknown

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37042..37269
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

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